RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 ZNF841Q6ZN19 808 aa12.74□□□□□ -0.37
CCS-206ENST00000530961 TMEM91Q6ZNR0 172 aa12.74□□□□□ -0.37
CCS-206ENST00000530961 ZNF788Q6ZQV5 615 aa12.74□□□□□ -0.37
CCS-206ENST00000530961 GLCCI1Q86VQ1 547 aa12.74□□□□□ -0.37
CCS-206ENST00000530961 NKAIN3Q8N8D7 197 aa12.74□□□□□ -0.37
CCS-206ENST00000530961 PNLDC1Q8NA58 520 aaKnown RBP12.74□□□□□ -0.37
CCS-206ENST00000530961 OR5T2Q8NGG2 359 aa12.74□□□□□ -0.37
CCS-206ENST00000530961 OR5D18Q8NGL1 313 aa12.74□□□□□ -0.37
CCS-206ENST00000530961 TMEM186Q96B77 213 aa12.74□□□□□ -0.37
CCS-206ENST00000530961 CCL13Q99616 98 aa12.74□□□□□ -0.37
CCS-206ENST00000530961 SLITRK2Q9H156 845 aa12.74□□□□□ -0.37
CCS-206ENST00000530961 SEBOXQ9HB31 216 aaPredicted RBP12.74□□□□□ -0.37
CCS-206ENST00000530961 SMURF1Q9HCE7 757 aa12.74□□□□□ -0.37
CCS-206ENST00000530961 CLN8Q9UBY8 286 aa12.74□□□□□ -0.37
CCS-206ENST00000530961 KCNS2Q9ULS6 477 aa12.74□□□□□ -0.37
CCS-206ENST00000530961 IGKV1D-17A0A075B6S4 117 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 RFPL4AA6NLU0 287 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 RFPL4AL1F8VTS6 287 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 GABRPO00591 440 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 ANGPTL7O43827 346 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 MAS1P04201 325 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 ZNF16P17020 682 aaPredicted RBP12.73□□□□□ -0.37
CCS-206ENST00000530961 GATA3P23771 443 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 PRDX2P32119 198 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 PTGFRP43088 359 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 GABRA2P47869 451 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 IL13RA1P78552 427 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 FABP5Q01469 135 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 NEDD8Q15843 81 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 CD276Q5ZPR3 534 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 WDR25Q64LD2 544 aaPredicted RBP12.73□□□□□ -0.37
CCS-206ENST00000530961 CD200R1LQ6Q8B3 271 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 ASCL4Q6XD76 172 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 RNF144BQ7Z419 303 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 TNFAIP8L1Q8WVP5 186 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 FOXRED1Q96CU9 486 aaPredicted RBP12.73□□□□□ -0.37
CCS-206ENST00000530961 SDSLQ96GA7 329 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 LPAR2Q9HBW0 351 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 YAE1D1Q9NRH1 226 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 HIF1ANQ9NWT6 349 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 GLS2Q9UI32 602 aa12.73□□□□□ -0.37
CCS-206ENST00000530961 HIVEP2P31629 2446 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 IGKV1-12A0A0C4DH73 117 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 TRDV1A0A1B0GX56 115 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 F8VVB4 439 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 F8VWA3 439 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 HAX1O00165 279 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 SIGLEC5O15389 551 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 NDUFB3O43676 98 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 ECDO95905 644 aaPredicted RBP12.72□□□□□ -0.37
CCS-206ENST00000530961 IGKV1D-12P01611 117 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 AMY2BP19961 511 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 BCL3P20749 454 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 ZFP36P26651 326 aaKnown RBP12.72□□□□□ -0.37
CCS-206ENST00000530961 NPBWR2P48146 333 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 GP2P55259 537 aaKnown RBP12.72□□□□□ -0.37
CCS-206ENST00000530961 SEC61A1P61619 476 aaKnown RBP12.72□□□□□ -0.37
CCS-206ENST00000530961 LCN2P80188 198 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 LRRC10Q5BKY1 277 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 SPIN3Q5JUX0 258 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 FAM27D1Q5T7N8 215 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 ELP2Q6IA86 826 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 FAM58AQ8N1B3 248 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 EMG1Q92979 244 aaKnown RBP12.72□□□□□ -0.37
CCS-206ENST00000530961 MUL1Q969V5 352 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 S100A13Q99584 98 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 UQCC2Q9BRT2 126 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 PPIL3Q9H2H8 161 aaKnown RBP12.72□□□□□ -0.37
CCS-206ENST00000530961 HMG20AQ9NP66 347 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 PCDHB16Q9NRJ7 776 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 RBFOX1Q9NWB1 397 aaKnown RBP12.72□□□□□ -0.37
CCS-206ENST00000530961 TMEM160Q9NX00 188 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 CTSZQ9UBR2 303 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 OR5V1Q9UGF6 321 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 ZNF222Q9UK12 451 aa12.72□□□□□ -0.37
CCS-206ENST00000530961 A0A0G2JMP0 313 aa12.71□□□□□ -0.37
CCS-206ENST00000530961 A0A0X1KG70 313 aa12.71□□□□□ -0.37
CCS-206ENST00000530961 MAGEA13PA6NCF6 341 aa12.71□□□□□ -0.37
CCS-206ENST00000530961 TRIM64CA6NLI5 447 aa12.71□□□□□ -0.37
CCS-206ENST00000530961 DVL1O14640 695 aa12.71□□□□□ -0.37
CCS-206ENST00000530961 PHF1O43189 567 aaPredicted RBP12.71□□□□□ -0.37
CCS-206ENST00000530961 ZNF780AO75290 641 aaPredicted RBP12.71□□□□□ -0.37
CCS-206ENST00000530961 SFTPBP07988 381 aa12.71□□□□□ -0.37
CCS-206ENST00000530961 CHRM2P08172 466 aa12.71□□□□□ -0.37
CCS-206ENST00000530961 MTNR1BP49286 362 aa12.71□□□□□ -0.37
CCS-206ENST00000530961 ZNF146Q15072 292 aa12.71□□□□□ -0.37
CCS-206ENST00000530961 RSU1Q15404 277 aa12.71□□□□□ -0.37
CCS-206ENST00000530961 GLT8D1Q68CQ7 371 aa12.71□□□□□ -0.37
CCS-206ENST00000530961 ZNF561Q8N587 486 aa12.71□□□□□ -0.37
CCS-206ENST00000530961 JAGN1Q8N5M9 183 aa12.71□□□□□ -0.37
CCS-206ENST00000530961 Q8NFD4 153 aa12.71□□□□□ -0.37
CCS-206ENST00000530961 OR4M2Q8NGB6 313 aa12.71□□□□□ -0.37
CCS-206ENST00000530961 GAFA1Q96PS6 74 aa12.71□□□□□ -0.37
CCS-206ENST00000530961 FAM192AQ9GZU8 254 aa12.71□□□□□ -0.37
CCS-206ENST00000530961 MAB21L2Q9Y586 359 aa12.71□□□□□ -0.37
CCS-206ENST00000530961 LOC105371242A0A075B767 164 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 J3QLI3 93 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 LIPFP07098 398 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 CD37P11049 281 aa12.7□□□□□ -0.38
CCS-206ENST00000530961 JUNBP17275 347 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms