RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 ST7LQ8TDW4 575 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 RASSF5Q8WWW0 418 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 TAMM41Q96BW9 452 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 TLCD1Q96CP7 247 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 MRPL13Q9BYD1 178 aaKnown RBP5.35□□□□□ -1.55
CSDE1-213ENST00000530784 HEXA-AS1Q9H8Q6 139 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 SIAEQ9HAT2 523 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 ESM1Q9NQ30 184 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 INIPQ9NRY2 104 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 OPN4Q9UHM6 478 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 LEF1Q9UJU2 399 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-213ENST00000530784 NDUFAF1Q9Y375 327 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 PPIAL4AQ9Y536 164 aa5.35□□□□□ -1.55
CSDE1-213ENST00000530784 PPIAL4EA0A075B759 164 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 PPIAL4CA0A0B4J2A2 164 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 C5orf49A4QMS7 147 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 NKX6-3A6NJ46 265 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 PPIAL4DF5H284 164 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 H3BSA7 217 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 ERLIN1O75477 346 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 OR7A10O76100 309 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 MT-ND1P03886 318 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 PPIAL4FP0DN26 164 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 AQP2P41181 271 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 RBM34P42696 430 aaKnown RBP5.34□□□□□ -1.55
CSDE1-213ENST00000530784 ZNF133P52736 654 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-213ENST00000530784 PPP1CBP62140 327 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 ERVK-25P63136 954 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 FMODQ06828 376 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 CD47Q08722 323 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 SELPLGQ14242 412 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 SGCAQ16586 387 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 LBHQ53QV2 105 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-213ENST00000530784 TMEM255AQ5JRV8 349 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 SLC25A30Q5SVS4 291 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 THEM4Q5T1C6 240 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 BTNL8Q6UX41 500 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 RFPL4BQ6ZWI9 263 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 C1orf174Q8IYL3 243 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 SPICQ8N5J4 248 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 SIGLECL1Q8N7X8 197 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 AKR7LQ8NHP1 331 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 PFN4Q8NHR9 129 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 KLF14Q8TD94 323 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-213ENST00000530784 GEMIN6Q8WXD5 167 aaKnown RBP5.34□□□□□ -1.55
CSDE1-213ENST00000530784 POP5Q969H6 163 aaKnown RBP5.34□□□□□ -1.55
CSDE1-213ENST00000530784 ST6GALNAC6Q969X2 333 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 NABP1Q96AH0 204 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 SGTBQ96EQ0 304 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 INTS14Q96SY0 518 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 CGREF1Q99674 301 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 PRSS27Q9BQR3 290 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 OR2J1Q9GZK6 312 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 NANOGQ9H9S0 305 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 TMBIM4Q9HC24 238 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 MEPEQ9NQ76 525 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-213ENST00000530784 UGT2A1Q9Y4X1 527 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 POMT1Q9Y6A1 747 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 MEGF8Q7Z7M0 2845 aa5.34□□□□□ -1.55
CSDE1-213ENST00000530784 HEATR1Q9H583 2144 aaKnown RBP5.33□□□□□ -1.56
CSDE1-213ENST00000530784 A0A087WZ39 114 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 TIMM8AO60220 97 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-213ENST00000530784 OR5F1O95221 314 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 IGF2P01344 180 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 IGHMP01871 453 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 CD55P08174 381 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 SELEP16581 610 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 FUT1P19526 365 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 GSTM3P21266 225 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 PRTN3P24158 256 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 LAP3P28838 519 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 ARHGDIAP52565 204 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 TAS2R41P59536 307 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 PCBD1P61457 104 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 TNFAIP6P98066 277 aaPredicted RBP5.33□□□□□ -1.56
CSDE1-213ENST00000530784 PSG4Q00888 419 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 FAM27BQ5VT28 67 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 ARL9Q6T311 187 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 PIGWQ7Z7B1 504 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 DEFB108BQ8NET1 73 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 OR10A6Q8NH74 314 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 FNDC8Q8TC99 324 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 TMEM239Q8WW34 195 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 DYDC1Q8WWB3 177 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 TSSK2Q96PF2 358 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 GPA33Q99795 319 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 OR2H1Q9GZK4 316 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 POLR2J2Q9GZM3 115 aaKnown RBP5.33□□□□□ -1.56
CSDE1-213ENST00000530784 POLR2J3Q9H1A7 115 aaKnown RBP5.33□□□□□ -1.56
CSDE1-213ENST00000530784 KAT8Q9H7Z6 458 aaKnown RBP5.33□□□□□ -1.56
CSDE1-213ENST00000530784 ELOVL3Q9HB03 270 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 PURGQ9UJV8 347 aaKnown RBP5.33□□□□□ -1.56
CSDE1-213ENST00000530784 NUP50Q9UKX7 468 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 SH3GLB1Q9Y371 365 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 MED31Q9Y3C7 131 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 NPTNQ9Y639 398 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 AUP1Q9Y679 476 aa5.33□□□□□ -1.56
CSDE1-213ENST00000530784 TENM1Q9UKZ4 2725 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 IGKV1D-43A0A0B4J1Z2 117 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 PRSS46E5RG02 174 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms