RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 FOXRED1Q96CU9 486 aaPredicted RBP16.71■□□□□ 0.27
TSPAN4-219ENST00000530404 CADM1Q9BY67 442 aaKnown RBP16.71■□□□□ 0.27
TSPAN4-219ENST00000530404 PKIBQ9C010 78 aa16.71■□□□□ 0.27
TSPAN4-219ENST00000530404 MTCH1Q9NZJ7 389 aa16.71■□□□□ 0.27
TSPAN4-219ENST00000530404 HILPDAQ9Y5L2 63 aa16.71■□□□□ 0.27
TSPAN4-219ENST00000530404 SNX5Q9Y5X3 404 aa16.71■□□□□ 0.27
TSPAN4-219ENST00000530404 IGKV1-27A0A075B6S5 117 aa16.7■□□□□ 0.26
TSPAN4-219ENST00000530404 ZNF737O75373 536 aa16.7■□□□□ 0.26
TSPAN4-219ENST00000530404 IL24Q13007 206 aa16.7■□□□□ 0.26
TSPAN4-219ENST00000530404 UBE2V2Q15819 145 aa16.7■□□□□ 0.26
TSPAN4-219ENST00000530404 AADACL4Q5VUY2 407 aa16.7■□□□□ 0.26
TSPAN4-219ENST00000530404 GDPD3Q7L5L3 318 aa16.7■□□□□ 0.26
TSPAN4-219ENST00000530404 OR4S1Q8NGB4 309 aa16.7■□□□□ 0.26
TSPAN4-219ENST00000530404 WIPF2Q8TF74 440 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-219ENST00000530404 MALSU1Q96EH3 234 aa16.7■□□□□ 0.26
TSPAN4-219ENST00000530404 IL4I1Q96RQ9 567 aa16.7■□□□□ 0.26
TSPAN4-219ENST00000530404 CLN6Q9NWW5 311 aa16.7■□□□□ 0.26
TSPAN4-219ENST00000530404 H2AFY2Q9P0M6 372 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-219ENST00000530404 IL36RNQ9UBH0 155 aa16.7■□□□□ 0.26
TSPAN4-219ENST00000530404 TMEM82A0PJX8 343 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 PEX14O75381 377 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 APOL3O95236 402 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 FAM107AO95990 144 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 CHRM2P08172 466 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 ACTR3P61158 418 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 BLCAPP62952 87 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 Q6ZSR3 168 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 NDUFA11Q86Y39 141 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 YIPF7Q8N8F6 280 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 OR11H6Q8NGC7 330 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 DNAJC9Q8WXX5 260 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 SGCDQ92629 289 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 CEP19Q96LK0 163 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 ZNF714Q96N38 554 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 PRSS22Q9GZN4 317 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 CHST6Q9GZX3 395 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 PLEKHA1Q9HB21 404 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 AURKAIP1Q9NWT8 199 aaPredicted RBP16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.69■□□□□ 0.262e-6■■■■□ 25.9
TSPAN4-219ENST00000530404 SLC7A11Q9UPY5 501 aa16.69■□□□□ 0.26
TSPAN4-219ENST00000530404 A0A1W2PRX2 142 aa16.68■□□□□ 0.26
TSPAN4-219ENST00000530404 XPNPEP2O43895 674 aa16.68■□□□□ 0.26
TSPAN4-219ENST00000530404 IGHA1P01876 353 aa16.68■□□□□ 0.26
TSPAN4-219ENST00000530404 CCL1P22362 96 aa16.68■□□□□ 0.26
TSPAN4-219ENST00000530404 ACTA2P62736 377 aa16.68■□□□□ 0.26
TSPAN4-219ENST00000530404 ACTG2P63267 376 aa16.68■□□□□ 0.26
TSPAN4-219ENST00000530404 ACTC1P68032 377 aa16.68■□□□□ 0.26
TSPAN4-219ENST00000530404 ACTA1P68133 377 aa16.68■□□□□ 0.26
TSPAN4-219ENST00000530404 EMX1Q04741 257 aaPredicted RBP16.68■□□□□ 0.26
TSPAN4-219ENST00000530404 NXNL2Q5VZ03 156 aa16.68■□□□□ 0.26
TSPAN4-219ENST00000530404 OR8H2Q8N162 312 aa16.68■□□□□ 0.26
TSPAN4-219ENST00000530404 DTX3Q8N9I9 347 aa16.68■□□□□ 0.26
TSPAN4-219ENST00000530404 TMEM163Q8TC26 289 aa16.68■□□□□ 0.26
TSPAN4-219ENST00000530404 NRBF2Q96F24 287 aa16.68■□□□□ 0.26
TSPAN4-219ENST00000530404 KRT84Q9NSB2 600 aa16.68■□□□□ 0.26
TSPAN4-219ENST00000530404 POMPQ9Y244 141 aa16.68■□□□□ 0.26
TSPAN4-219ENST00000530404 DNAH9Q9NYC9 4486 aa16.68■□□□□ 0.26
TSPAN4-219ENST00000530404 DHRS7CA6NNS2 312 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 F2RL2O00254 374 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 GYG2O15488 501 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 SYT7O43581 403 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 CALCBP10092 127 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 HOXB6P17509 224 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 VDAC2P45880 294 aaPredicted RBP16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 SNU13P55769 128 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 OR12D2P58182 307 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 EFNB1P98172 346 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 SLC34A1Q06495 639 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 SLX4IPQ5VYV7 408 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 C12orf73Q69YU5 71 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 SLC25A26Q70HW3 274 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 REC114Q7Z4M0 266 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 CATSPERDQ86XM0 798 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 ZNF676Q8N7Q3 588 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 OR52N4Q8NGI2 321 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 NDNFQ8TB73 568 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 EMG1Q92979 244 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 UTP4Q969X6 686 aaKnown RBP16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 PHF21AQ96BD5 680 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 SNX22Q96L94 193 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 MNTQ99583 582 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 PRRG3Q9BZD7 231 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 WNT10AQ9GZT5 417 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 PITPNC1Q9UKF7 332 aa16.67■□□□□ 0.26
TSPAN4-219ENST00000530404 ZAR1LA6NP61 321 aa16.66■□□□□ 0.26
TSPAN4-219ENST00000530404 ALX3O95076 343 aa16.66■□□□□ 0.26
TSPAN4-219ENST00000530404 RBP4P02753 201 aa16.66■□□□□ 0.26
TSPAN4-219ENST00000530404 KRT8P05787 483 aa16.66■□□□□ 0.26
TSPAN4-219ENST00000530404 DUSP1P28562 367 aa16.66■□□□□ 0.26
TSPAN4-219ENST00000530404 EGFL6Q8IUX8 553 aa16.66■□□□□ 0.26
TSPAN4-219ENST00000530404 OR4F17Q8NGA8 305 aa16.66■□□□□ 0.26
TSPAN4-219ENST00000530404 OR4F4Q96R69 305 aa16.66■□□□□ 0.26
TSPAN4-219ENST00000530404 NECAP2Q9NVZ3 263 aa16.66■□□□□ 0.26
TSPAN4-219ENST00000530404 IGHV2-26A0A0B4J1V2 119 aa16.65■□□□□ 0.26
TSPAN4-219ENST00000530404 MMP23AO75900 390 aa16.65■□□□□ 0.26
TSPAN4-219ENST00000530404 HAND1O96004 215 aa16.65■□□□□ 0.26
TSPAN4-219ENST00000530404 GABRR1P24046 479 aa16.65■□□□□ 0.26
TSPAN4-219ENST00000530404 GRK1Q15835 563 aa16.65■□□□□ 0.26
TSPAN4-219ENST00000530404 DNAL1Q4LDG9 190 aa16.65■□□□□ 0.26
TSPAN4-219ENST00000530404 BAIAP2L2Q6UXY1 529 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms