RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 GTF2A1P52655 376 aaPredicted RBP2.99□□□□□ -1.93
CASP4-208ENST00000530309 KRTAP10-1P60331 282 aa2.99□□□□□ -1.93
CASP4-208ENST00000530309 CDNFQ49AH0 187 aa2.99□□□□□ -1.93
CASP4-208ENST00000530309 MNS1Q8NEH6 495 aa2.99□□□□□ -1.93
CASP4-208ENST00000530309 NDNFQ8TB73 568 aa2.99□□□□□ -1.93
CASP4-208ENST00000530309 ITFG2Q969R8 447 aa2.99□□□□□ -1.93
CASP4-208ENST00000530309 YIPF6Q96EC8 236 aa2.99□□□□□ -1.93
CASP4-208ENST00000530309 RNF170Q96K19 258 aa2.99□□□□□ -1.93
CASP4-208ENST00000530309 C20orf144Q9BQM9 153 aa2.99□□□□□ -1.93
CASP4-208ENST00000530309 ZNF649Q9BS31 505 aa2.99□□□□□ -1.93
CASP4-208ENST00000530309 ANGPTL4Q9BY76 406 aa2.99□□□□□ -1.93
CASP4-208ENST00000530309 API5Q9BZZ5 524 aaKnown RBP2.99□□□□□ -1.93
CASP4-208ENST00000530309 SND1-IT1Q9HBX3 110 aa2.99□□□□□ -1.93
CASP4-208ENST00000530309 SLC7A11Q9UPY5 501 aa2.99□□□□□ -1.93
CASP4-208ENST00000530309 ORC6Q9Y5N6 252 aa2.99□□□□□ -1.93
CASP4-208ENST00000530309 ERBINQ96RT1 1412 aa2.99□□□□□ -1.93
CASP4-208ENST00000530309 ABCA10Q8WWZ4 1543 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 ELP1O95163 1332 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 CCDC141Q6ZP82 1450 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 DNMT1P26358 1616 aaKnown RBP2.98□□□□□ -1.93
CASP4-208ENST00000530309 ANKRD20A5PA0PJZ0 165 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 SEC14L6B5MCN3 397 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 ALOX12BO75342 701 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 HLA-DMAP28067 261 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 RGS6P49758 472 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 ATP5G2Q06055 141 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 IFFO1Q0D2I5 559 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 TMEM69Q5SWH9 247 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 NT5DC3Q86UY8 548 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 LRRC8AQ8IWT6 810 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 DERL3Q96Q80 235 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 SHANK2-AS3Q9BTD1 123 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 TMED9Q9BVK6 235 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 COA1Q9GZY4 146 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 C9orf84Q5VXU9 1444 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 YTHDC2Q9H6S0 1430 aaKnown RBP2.98□□□□□ -1.93
CASP4-208ENST00000530309 PBRM1Q86U86 1689 aa2.98□□□□□ -1.93
CASP4-208ENST00000530309 SUPT6HQ7KZ85 1726 aaKnown RBP2.97□□□□□ -1.93
CASP4-208ENST00000530309 LRRIQ1Q96JM4 1722 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 DNMBPQ6XZF7 1577 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 PPIP5K1Q6PFW1 1433 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 GOLGA6L4A6NEF3 574 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 RHOCP08134 193 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 CD9P21926 228 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 HNRNPA1L2Q32P51 320 aaKnown RBP2.97□□□□□ -1.93
CASP4-208ENST00000530309 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 SETD3Q86TU7 594 aaPredicted RBP2.97□□□□□ -1.93
CASP4-208ENST00000530309 OTUD6BQ8N6M0 293 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 FAM57AQ8TBR7 257 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 NT5CQ8TCD5 201 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 MITD1Q8WV92 249 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 FAM210AQ96ND0 272 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 MRPL20Q9BYC9 149 aaKnown RBP2.97□□□□□ -1.93
CASP4-208ENST00000530309 PRO0628Q9UI54 55 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 PPRC1Q5VV67 1664 aaKnown RBP2.97□□□□□ -1.93
CASP4-208ENST00000530309 HMGXB3Q12766 1538 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 EFCAB6Q5THR3 1501 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 ASXL1Q8IXJ9 1541 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 KIF24Q5T7B8 1368 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 TRPM1Q7Z4N2 1603 aa2.97□□□□□ -1.93
CASP4-208ENST00000530309 A2MP01023 1474 aa2.96□□□□□ -1.93
CASP4-208ENST00000530309 SHANK2Q9UPX8 1470 aa2.96□□□□□ -1.93
CASP4-208ENST00000530309 NEMFO60524 1076 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 SHOX2O60902 331 aaPredicted RBP2.96□□□□□ -1.94
CASP4-208ENST00000530309 NRASP01111 189 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 HRASP01112 189 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 KRASP01116 189 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 IGKV4-1P06312 121 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 PRKCDQ05655 676 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 MEF2CQ06413 473 aaPredicted RBP2.96□□□□□ -1.94
CASP4-208ENST00000530309 PMVKQ15126 192 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 TOMM34Q15785 309 aaPredicted RBP2.96□□□□□ -1.94
CASP4-208ENST00000530309 NDUFAF6Q330K2 333 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 ZFAND6Q6FIF0 208 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 FAM131AQ6UXB0 335 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 TRMT10CQ7L0Y3 403 aaKnown RBP2.96□□□□□ -1.94
CASP4-208ENST00000530309 ITPRIPQ8IWB1 547 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 OR52K1Q8NGK4 314 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 OR13C9Q8NGT0 318 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 TM6SF2Q9BZW4 377 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 RAB23Q9ULC3 237 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 SLC22A7Q9Y694 548 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 V9GYY9 64 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 ABCC3O15438 1527 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 URB2Q14146 1524 aaKnown RBP2.96□□□□□ -1.94
CASP4-208ENST00000530309 ERCC6Q03468 1493 aa2.96□□□□□ -1.94
CASP4-208ENST00000530309 CFAP74Q9C0B2 1584 aa2.95□□□□□ -1.94
CASP4-208ENST00000530309 CCDC171Q6TFL3 1326 aa2.95□□□□□ -1.94
CASP4-208ENST00000530309 KIF21AQ7Z4S6 1674 aa2.95□□□□□ -1.94
CASP4-208ENST00000530309 ADGBQ8N7X0 1667 aa2.95□□□□□ -1.94
CASP4-208ENST00000530309 RNF17Q9BXT8 1623 aaKnown RBP2.95□□□□□ -1.94
CASP4-208ENST00000530309 TRAV8-7A0A075B6U6 113 aa2.95□□□□□ -1.94
CASP4-208ENST00000530309 IGKV2-24A0A0C4DH68 120 aa2.95□□□□□ -1.94
CASP4-208ENST00000530309 IZUMO1RA6ND01 250 aa2.95□□□□□ -1.94
CASP4-208ENST00000530309 H3BQF6 201 aa2.95□□□□□ -1.94
CASP4-208ENST00000530309 OR5AC1P0C628 307 aa2.95□□□□□ -1.94
CASP4-208ENST00000530309 HTR2CP28335 458 aa2.95□□□□□ -1.94
CASP4-208ENST00000530309 ARR3P36575 388 aa2.95□□□□□ -1.94
CASP4-208ENST00000530309 OR12D2P58182 307 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms