RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 DBX1A6NMT0 343 aa15.8■□□□□ 0.12
LTBP3-210ENST00000528516 SNRPCP09234 159 aaKnown RBP15.8■□□□□ 0.12
LTBP3-210ENST00000528516 PNLIPP16233 465 aa15.8■□□□□ 0.12
LTBP3-210ENST00000528516 LIPHQ8WWY8 451 aa15.8■□□□□ 0.12
LTBP3-210ENST00000528516 NINJ1Q92982 152 aa15.8■□□□□ 0.12
LTBP3-210ENST00000528516 TUBA4BQ9H853 241 aa15.8■□□□□ 0.12
LTBP3-210ENST00000528516 BCO1Q9HAY6 547 aa15.8■□□□□ 0.12
LTBP3-210ENST00000528516 ERGP11308 486 aa15.8■□□□□ 0.12
LTBP3-210ENST00000528516 SNCAP37840 140 aa15.8■□□□□ 0.12
LTBP3-210ENST00000528516 ASB5Q8WWX0 329 aa15.8■□□□□ 0.12
LTBP3-210ENST00000528516 NMNAT2Q9BZQ4 307 aa15.8■□□□□ 0.12
LTBP3-210ENST00000528516 M0R135 149 aa15.79■□□□□ 0.12
LTBP3-210ENST00000528516 HOXC4P09017 264 aaPredicted RBP15.79■□□□□ 0.12
LTBP3-210ENST00000528516 CCL2P13500 99 aa15.79■□□□□ 0.12
LTBP3-210ENST00000528516 VHLLQ6RSH7 139 aa15.79■□□□□ 0.12
LTBP3-210ENST00000528516 OR1N1Q8NGS0 311 aa15.79■□□□□ 0.12
LTBP3-210ENST00000528516 ZNF799Q96GE5 643 aa15.79■□□□□ 0.12
LTBP3-210ENST00000528516 TMEM68Q96MH6 324 aa15.79■□□□□ 0.12
LTBP3-210ENST00000528516 DOCK10Q96BY6 2186 aa15.79■□□□□ 0.12
LTBP3-210ENST00000528516 IFNA5P01569 189 aa15.79■□□□□ 0.12
LTBP3-210ENST00000528516 GPR3P46089 330 aa15.79■□□□□ 0.12
LTBP3-210ENST00000528516 EFNA3P52797 238 aa15.79■□□□□ 0.12
LTBP3-210ENST00000528516 RPS16P62249 146 aaKnown RBP15.79■□□□□ 0.12
LTBP3-210ENST00000528516 UBE2V2Q15819 145 aa15.79■□□□□ 0.12
LTBP3-210ENST00000528516 ANKRD55Q3KP44 614 aa15.79■□□□□ 0.12
LTBP3-210ENST00000528516 ZNF684Q5T5D7 378 aa15.79■□□□□ 0.12
LTBP3-210ENST00000528516 THOC3Q96J01 351 aaKnown RBP15.79■□□□□ 0.12
LTBP3-210ENST00000528516 METTL9Q9H1A3 318 aa15.79■□□□□ 0.12
LTBP3-210ENST00000528516 DNAJB11Q9UBS4 358 aa15.79■□□□□ 0.12
LTBP3-210ENST00000528516 MESP1Q9BRJ9 268 aa15.79■□□□□ 0.12
LTBP3-210ENST00000528516 S1PR5Q9H228 398 aa15.79■□□□□ 0.12
LTBP3-210ENST00000528516 TIMM8BQ9Y5J9 83 aaPredicted RBP15.79■□□□□ 0.12
LTBP3-210ENST00000528516 ZNF407Q9C0G0 2248 aa15.79■□□□□ 0.12
LTBP3-210ENST00000528516 SSR4P51571 173 aa15.78■□□□□ 0.12
LTBP3-210ENST00000528516 FHL1Q13642 323 aa15.78■□□□□ 0.12
LTBP3-210ENST00000528516 TSPO2Q5TGU0 170 aa15.78■□□□□ 0.12
LTBP3-210ENST00000528516 SNX22Q96L94 193 aa15.78■□□□□ 0.12
LTBP3-210ENST00000528516 PRDM13Q9H4Q3 707 aa15.78■□□□□ 0.12
LTBP3-210ENST00000528516 TNFSF11O14788 317 aa15.78■□□□□ 0.12
LTBP3-210ENST00000528516 SLC25A1P53007 311 aa15.78■□□□□ 0.12
LTBP3-210ENST00000528516 SLC35A1P78382 337 aa15.78■□□□□ 0.12
LTBP3-210ENST00000528516 C6orf201Q7Z4U5 140 aa15.78■□□□□ 0.12
LTBP3-210ENST00000528516 GJC3Q8NFK1 279 aa15.78■□□□□ 0.12
LTBP3-210ENST00000528516 PTPMT1Q8WUK0 201 aaPredicted RBP15.78■□□□□ 0.12
LTBP3-210ENST00000528516 ZFHX2Q9C0A1 2572 aaPredicted RBP15.78■□□□□ 0.12
LTBP3-210ENST00000528516 IGHV1OR21-1A0A087WYE8 117 aa15.78■□□□□ 0.12
LTBP3-210ENST00000528516 FRG2CA6NGY1 282 aa15.78■□□□□ 0.12
LTBP3-210ENST00000528516 ZNF728P0DKX0 622 aa15.78■□□□□ 0.12
LTBP3-210ENST00000528516 HKR1P10072 659 aa15.78■□□□□ 0.12
LTBP3-210ENST00000528516 MDKP21741 143 aaPredicted RBP15.78■□□□□ 0.12
LTBP3-210ENST00000528516 RPS4Y1P22090 263 aaKnown RBP15.78■□□□□ 0.12
LTBP3-210ENST00000528516 OR3A4PP47883 348 aa15.78■□□□□ 0.12
LTBP3-210ENST00000528516 MRPS34P82930 218 aaKnown RBP15.78■□□□□ 0.12
LTBP3-210ENST00000528516 MKXQ8IYA7 352 aa15.78■□□□□ 0.12
LTBP3-210ENST00000528516 ANAPC1Q9H1A4 1944 aa15.78■□□□□ 0.12
LTBP3-210ENST00000528516 TGIF2-C20orf24A0A0A6YYL0 155 aa15.77■□□□□ 0.12
LTBP3-210ENST00000528516 RAMP1O60894 148 aa15.77■□□□□ 0.12
LTBP3-210ENST00000528516 RRADP55042 308 aa15.77■□□□□ 0.12
LTBP3-210ENST00000528516 PRRX2Q99811 253 aa15.77■□□□□ 0.12
LTBP3-210ENST00000528516 TCF20Q9UGU0 1960 aaKnown RBP15.77■□□□□ 0.12
LTBP3-210ENST00000528516 NOTCH4Q99466 2003 aa15.77■□□□□ 0.12
LTBP3-210ENST00000528516 PIAS2O75928 621 aa15.77■□□□□ 0.12
LTBP3-210ENST00000528516 BCKDHBP21953 392 aa15.77■□□□□ 0.12
LTBP3-210ENST00000528516 SLC37A1P57057 533 aa15.77■□□□□ 0.12
LTBP3-210ENST00000528516 ARG2P78540 354 aa15.77■□□□□ 0.12
LTBP3-210ENST00000528516 CCL7P80098 99 aa15.77■□□□□ 0.12
LTBP3-210ENST00000528516 ATG4DQ86TL0 474 aaPredicted RBP15.77■□□□□ 0.12
LTBP3-210ENST00000528516 SLC26A1Q9H2B4 701 aa15.77■□□□□ 0.12
LTBP3-210ENST00000528516 RCL1Q9Y2P8 373 aaKnown RBP15.77■□□□□ 0.12
LTBP3-210ENST00000528516 HSD17B6O14756 317 aa15.77■□□□□ 0.11
LTBP3-210ENST00000528516 SOCS1O15524 211 aa15.77■□□□□ 0.11
LTBP3-210ENST00000528516 KLK2P20151 261 aa15.77■□□□□ 0.11
LTBP3-210ENST00000528516 PCP4P48539 62 aa15.77■□□□□ 0.11
LTBP3-210ENST00000528516 FOXK1P85037 733 aa15.77■□□□□ 0.11
LTBP3-210ENST00000528516 ZNF260Q3ZCT1 412 aa15.77■□□□□ 0.11
LTBP3-210ENST00000528516 SPATA46Q5T0L3 261 aa15.77■□□□□ 0.11
LTBP3-210ENST00000528516 RARRES2Q99969 163 aa15.77■□□□□ 0.11
LTBP3-210ENST00000528516 CXorf51AA0A1B0GTR3 108 aa15.76■□□□□ 0.11
LTBP3-210ENST00000528516 TK1P04183 234 aa15.76■□□□□ 0.11
LTBP3-210ENST00000528516 APOBEC1P41238 236 aaKnown RBP15.76■□□□□ 0.11
LTBP3-210ENST00000528516 HEPN1Q6WQI6 88 aa15.76■□□□□ 0.11
LTBP3-210ENST00000528516 NKAIN3Q8N8D7 197 aa15.76■□□□□ 0.11
LTBP3-210ENST00000528516 MENTQ9BUN1 341 aa15.76■□□□□ 0.11
LTBP3-210ENST00000528516 C5orf66Q9H5L9 145 aa15.76■□□□□ 0.11
LTBP3-210ENST00000528516 LRFN1Q9P244 771 aa15.76■□□□□ 0.11
LTBP3-210ENST00000528516 CBY1Q9Y3M2 126 aa15.76■□□□□ 0.11
LTBP3-210ENST00000528516 IGHV4-34P06331 123 aa15.76■□□□□ 0.11
LTBP3-210ENST00000528516 SOD3P08294 240 aa15.76■□□□□ 0.11
LTBP3-210ENST00000528516 ZNF25P17030 456 aaPredicted RBP15.76■□□□□ 0.11
LTBP3-210ENST00000528516 PPP1CCP36873 323 aaKnown RBP15.76■□□□□ 0.11
LTBP3-210ENST00000528516 UBE2NP61088 152 aaKnown RBP15.76■□□□□ 0.11
LTBP3-210ENST00000528516 CMTM1Q8IZ96 169 aa15.76■□□□□ 0.11
LTBP3-210ENST00000528516 HLA-CQ95604 372 aa15.76■□□□□ 0.11
LTBP3-210ENST00000528516 REEP6Q96HR9 211 aa15.76■□□□□ 0.11
LTBP3-210ENST00000528516 GABRG3Q99928 467 aa15.76■□□□□ 0.11
LTBP3-210ENST00000528516 MYO7BQ6PIF6 2116 aa15.76■□□□□ 0.11
LTBP3-210ENST00000528516 TRBV6-7A0A0A0MS04 114 aa15.76■□□□□ 0.11
LTBP3-210ENST00000528516 GLB1P16278 677 aa15.76■□□□□ 0.11
LTBP3-210ENST00000528516 BTF3P20290 206 aaKnown RBP15.76■□□□□ 0.11
LTBP3-210ENST00000528516 FCARP24071 287 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms