RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 IL24Q13007 206 aa9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 PDZK1IP1Q13113 114 aa9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 GPR141Q7Z602 305 aa9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 PEG10Q86TG7 708 aaKnown RBP9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 NKAIN3Q8N8D7 197 aa9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 POC1AQ8NBT0 407 aa9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 DEFB108BQ8NET1 73 aa9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 OR10Z1Q8NGY1 313 aa9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 ZNF671Q8TAW3 534 aa9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 RAB1CQ92928 201 aa9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 MSI2Q96DH6 328 aaKnown RBP9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 CPNE2Q96FN4 548 aaPredicted RBP9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 CEP19Q96LK0 163 aa9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 FUNDC2Q9BWH2 189 aa9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 NAA50Q9GZZ1 169 aaKnown RBP9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 SLITRK2Q9H156 845 aa9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 SMURF1Q9HCE7 757 aa9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 SNTG1Q9NSN8 517 aa9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 MTCH1Q9NZJ7 389 aa9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 AK6Q9Y3D8 172 aaKnown RBP9.65□□□□□ -0.86
CCDC90B-210ENST00000528149 KMT2CQ8NEZ4 4911 aaKnown RBP9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 PPIAL4EA0A075B759 164 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 OOEPA6NGQ2 149 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 PPIAL4DF5H284 164 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 LGALS8O00214 317 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 TCF21O43680 179 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 AIREO43918 545 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 NXPH2O95156 264 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 CDRT1O95170 752 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 PPIAL4FP0DN26 164 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 TMEM225BP0DP42 221 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 CALCBP10092 127 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 SLC25A16P16260 332 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 GLRA1P23415 457 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 FGF9P31371 208 aaPredicted RBP9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 CFHR2P36980 270 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 MDH2P40926 338 aaKnown RBP9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 NPBWR2P48146 333 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 SNU13P55769 128 aaKnown RBP9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 OR10A3P58181 314 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 LOXL1Q08397 574 aaPredicted RBP9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 TIMM50Q3ZCQ8 353 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 GPR107Q5VW38 600 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 CYB5R2Q6BCY4 276 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 SLC16A12Q6ZSM3 486 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 C1QL2Q7Z5L3 287 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 FAM90A1Q86YD7 464 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 PNLDC1Q8NA58 520 aaKnown RBP9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 OR4D6Q8NGJ1 314 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 OR10K1Q8NGX5 313 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 OR51F2Q8NH61 342 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 GAL3ST1Q99999 423 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 NRIP2Q9BQI9 281 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 KCNK15Q9H427 330 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 CNTD2Q9H8S5 307 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 ELL3Q9HB65 397 aaPredicted RBP9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 RBFOX1Q9NWB1 397 aaKnown RBP9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 IL36RNQ9UBH0 155 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 DNAJB11Q9UBS4 358 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 GSTK1Q9Y2Q3 226 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 MRPS28Q9Y2Q9 187 aaKnown RBP9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 PPIAL4AQ9Y536 164 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 WNK2Q9Y3S1 2297 aa9.64□□□□□ -0.87
CCDC90B-210ENST00000528149 TRAV1-2A0A0B4J238 106 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 MEGF11A6BM72 1044 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 TRAPPC2LH3BP13 241 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 CYB5AP00167 134 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 GYPAP02724 150 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 SFTPBP07988 381 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 CLEC2LP0C7M8 214 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 PTGFRP43088 359 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 RPL5P46777 297 aaKnown RBP9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 CEBPDP49716 269 aaPredicted RBP9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 ERVK11-1P61568 191 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 SEC61A1P61619 476 aaKnown RBP9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 NCS1P62166 190 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 SMIM21Q3B7S5 101 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 ZNF404Q494X3 552 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 GLT8D1Q68CQ7 371 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 AWAT2Q6E213 333 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 ACP7Q6ZNF0 438 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 LYPD6Q86Y78 171 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 MKXQ8IYA7 352 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 OR5T2Q8NGG2 359 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 EMG1Q92979 244 aaKnown RBP9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 KCTD7Q96MP8 289 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 TMEM246Q9BRR3 403 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 KCNS2Q9ULS6 477 aa9.63□□□□□ -0.87
CCDC90B-210ENST00000528149 WNK1Q9H4A3 2382 aa9.62□□□□□ -0.87
CCDC90B-210ENST00000528149 TRAV38-1A0A0B4J264 116 aa9.62□□□□□ -0.87
CCDC90B-210ENST00000528149 A0A1B0GW55 424 aa9.62□□□□□ -0.87
CCDC90B-210ENST00000528149 A0A1W2PP11 408 aa9.62□□□□□ -0.87
CCDC90B-210ENST00000528149 CEACAM18A8MTB9 384 aa9.62□□□□□ -0.87
CCDC90B-210ENST00000528149 NOS1APO75052 506 aaPredicted RBP9.62□□□□□ -0.87
CCDC90B-210ENST00000528149 KDM4BO94953 1096 aa9.62□□□□□ -0.87
CCDC90B-210ENST00000528149 GABARAPO95166 117 aa9.62□□□□□ -0.87
CCDC90B-210ENST00000528149 DUX4L2P0CJ85 424 aa9.62□□□□□ -0.87
CCDC90B-210ENST00000528149 DUX4L3P0CJ86 424 aa9.62□□□□□ -0.87
CCDC90B-210ENST00000528149 DUX4L4P0CJ87 422 aa9.62□□□□□ -0.87
CCDC90B-210ENST00000528149 DUX4L5P0CJ88 424 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms