RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 REPIN1Q9BWE0 567 aaKnown RBP13.28□□□□□ -0.28
USH1C-207ENST00000527720 SHARPINQ9H0F6 387 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 SLC6A15Q9H2J7 730 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 GLS2Q9UI32 602 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 AHCTF1Q8WYP5 2266 aa13.27□□□□□ -0.28
USH1C-207ENST00000527720 MED13Q9UHV7 2174 aa13.27□□□□□ -0.28
USH1C-207ENST00000527720 FAM166BA8MTA8 275 aa13.27□□□□□ -0.28
USH1C-207ENST00000527720 PDCD6O75340 191 aa13.27□□□□□ -0.28
USH1C-207ENST00000527720 PRSS12P56730 875 aa13.27□□□□□ -0.28
USH1C-207ENST00000527720 RBM11P57052 281 aaKnown RBP13.27□□□□□ -0.28
USH1C-207ENST00000527720 PLGLB1Q02325 96 aa13.27□□□□□ -0.28
USH1C-207ENST00000527720 MALLQ13021 153 aa13.27□□□□□ -0.28
USH1C-207ENST00000527720 TUSC1Q2TAM9 212 aa13.27□□□□□ -0.28
USH1C-207ENST00000527720 CALHM2Q9HA72 323 aa13.27□□□□□ -0.28
USH1C-207ENST00000527720 ZNF850A8MQ14 1090 aa13.27□□□□□ -0.29
USH1C-207ENST00000527720 PRSS44E7EML9 344 aa13.27□□□□□ -0.29
USH1C-207ENST00000527720 KLRC4-KLRK1H3BQV0 150 aa13.27□□□□□ -0.29
USH1C-207ENST00000527720 NME2P1O60361 137 aa13.27□□□□□ -0.29
USH1C-207ENST00000527720 SCO1O75880 301 aa13.27□□□□□ -0.29
USH1C-207ENST00000527720 SFTPBP07988 381 aa13.27□□□□□ -0.29
USH1C-207ENST00000527720 SP1P08047 785 aa13.27□□□□□ -0.29
USH1C-207ENST00000527720 NME2P22392 152 aa13.27□□□□□ -0.29
USH1C-207ENST00000527720 PPIAP62937 165 aaKnown RBP13.27□□□□□ -0.29
USH1C-207ENST00000527720 PIGYQ3MUY2 71 aa13.27□□□□□ -0.29
USH1C-207ENST00000527720 FAM74A1Q5RGS3 127 aa13.27□□□□□ -0.29
USH1C-207ENST00000527720 TMEM211Q6ICI0 200 aa13.27□□□□□ -0.29
USH1C-207ENST00000527720 LINC00696Q6ZRV3 163 aa13.27□□□□□ -0.29
USH1C-207ENST00000527720 SLC30A7Q8NEW0 376 aa13.27□□□□□ -0.29
USH1C-207ENST00000527720 APH1AQ96BI3 265 aa13.27□□□□□ -0.29
USH1C-207ENST00000527720 PRRG4Q9BZD6 226 aa13.27□□□□□ -0.29
USH1C-207ENST00000527720 ZNF286AQ9HBT8 521 aa13.27□□□□□ -0.29
USH1C-207ENST00000527720 GPR160Q9UJ42 338 aa13.27□□□□□ -0.29
USH1C-207ENST00000527720 MPTX1A8MV57 137 aa13.26□□□□□ -0.29
USH1C-207ENST00000527720 ACTL6AO96019 429 aa13.26□□□□□ -0.29
USH1C-207ENST00000527720 ARR3P36575 388 aa13.26□□□□□ -0.29
USH1C-207ENST00000527720 BAP18Q8IXM2 172 aa13.26□□□□□ -0.29
USH1C-207ENST00000527720 CCDC36Q8IYA8 594 aa13.26□□□□□ -0.29
USH1C-207ENST00000527720 SAXO1Q8IYX7 474 aa13.26□□□□□ -0.29
USH1C-207ENST00000527720 MDS2Q8NDY4 140 aa13.26□□□□□ -0.29
USH1C-207ENST00000527720 APOBEC3DQ96AK3 386 aaPredicted RBP13.26□□□□□ -0.29
USH1C-207ENST00000527720 RRNAD1Q96FB5 475 aaKnown RBP13.26□□□□□ -0.29
USH1C-207ENST00000527720 PLA2G3Q9NZ20 509 aa13.26□□□□□ -0.29
USH1C-207ENST00000527720 PRR13Q9NZ81 148 aa13.26□□□□□ -0.29
USH1C-207ENST00000527720 DNAJC13O75165 2243 aa13.26□□□□□ -0.29
USH1C-207ENST00000527720 FUT3P21217 361 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 RRADP55042 308 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 UNQ6126/PRO20091Q6UXV3 157 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 ZNF611Q8N823 705 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 FNDC9Q8TBE3 224 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 OPA3Q9H6K4 179 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 ACKR4Q9NPB9 350 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 KCNIP3Q9Y2W7 256 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 KNTC1P50748 2209 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 PQLC2LA1A4F0 135 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 FGF16O43320 207 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 SS18L1O75177 396 aaPredicted RBP13.25□□□□□ -0.29
USH1C-207ENST00000527720 TNFSF15O95150 251 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 HOXB5P09067 269 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 ZNF728P0DKX0 622 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 OPRM1P35372 400 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 MEOX1P50221 254 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 RAB32Q13637 225 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 RBM39Q14498 530 aaKnown RBP13.25□□□□□ -0.29
USH1C-207ENST00000527720 HES3Q5TGS1 186 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 ELP2Q6IA86 826 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 CALHM1Q8IU99 346 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 GALNT14Q96FL9 552 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 C12orf4Q9NQ89 552 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 CYTL1Q9NRR1 136 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 OR5AC2Q9NZP5 309 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 IL17BQ9UHF5 180 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 ZNF407Q9C0G0 2248 aa13.25□□□□□ -0.29
USH1C-207ENST00000527720 MUC3AQ02505 3323 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 CST4P01036 141 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 IFNA21P01568 189 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 HOXD4P09016 255 aaPredicted RBP13.24□□□□□ -0.29
USH1C-207ENST00000527720 UCP3P55916 312 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 DPPA2Q7Z7J5 298 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 STPG2Q8N412 459 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 OR56B2PQ8NGI1 322 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 PIGMQ9H3S5 423 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 ZNF581Q9P0T4 197 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 TUBD1Q9UJT1 453 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 A0A096LPE4 126 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 A0A1W2PPZ6 126 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 C5orf49A4QMS7 147 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 LGALS8O00214 317 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 TAAR5O14804 337 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 HLA-HP01893 362 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 ZNF806P0C7X5 589 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 EIF5AP63241 154 aaKnown RBP13.24□□□□□ -0.29
USH1C-207ENST00000527720 SLC22A25Q6T423 547 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 UQCC3Q6UW78 93 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 DHRS13Q6UX07 377 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 SLC25A26Q70HW3 274 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 MRPL21Q7Z2W9 205 aaKnown RBP13.24□□□□□ -0.29
USH1C-207ENST00000527720 ZFP62Q8NB50 900 aaPredicted RBP13.24□□□□□ -0.29
USH1C-207ENST00000527720 PAPOLGQ9BWT3 736 aaKnown RBP13.24□□□□□ -0.29
USH1C-207ENST00000527720 LIME1Q9H400 295 aa13.24□□□□□ -0.29
USH1C-207ENST00000527720 TAS2R3Q9NYW6 316 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms