RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 PPIAL4DF5H284 164 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 KLRC4-KLRK1H3BQV0 150 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 LEFTY2O00292 366 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 GNG7O60262 68 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 HYPMO75409 117 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 DEDDO75618 318 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 RCBTB2O95199 551 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 SLC2A10O95528 541 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 HRASP01112 189 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 JMJD7P0C870 316 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 PPIAL4FP0DN26 164 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 PPIAL4GP0DN37 164 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 TUBG1P23258 451 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 TIMP3P35625 211 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 APOBEC1P41238 236 aaKnown RBP5.1□□□□□ -1.59
CD44-225ENST00000527326 FRKP42685 505 aaPredicted RBP5.1□□□□□ -1.59
CD44-225ENST00000527326 CSNK1A1P48729 337 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 CYB561P49447 251 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 GFRA1P56159 465 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 TLE3Q04726 772 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 ZNF154Q13106 437 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 GGTLC2Q14390 218 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 LTBP1Q14766 1721 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 PRSS53Q2L4Q9 553 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 PRTGQ2VWP7 1150 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 TDRG1Q3Y452 100 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 TP53I3Q53FA7 332 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 RAET1LQ5VY80 246 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 KCNIP4Q6PIL6 250 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 GDF7Q7Z4P5 450 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 CENPVQ7Z7K6 275 aaPredicted RBP5.1□□□□□ -1.59
CD44-225ENST00000527326 SGPP2Q8IWX5 399 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 PIANPQ8IYJ0 282 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 CHST13Q8NET6 341 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 OR11H1Q8NG94 326 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 OR4K1Q8NGD4 311 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 OR11H2Q8NH07 326 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 OR5AK3PQ8NH89 298 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 ASB5Q8WWX0 329 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 OR5P2Q8WZ92 322 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 PSMF1Q92530 271 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 C1orf159Q96HA4 380 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 LMLNQ96KR4 655 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 CAPNS2Q96L46 248 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 P2RX4Q99571 388 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 SMAD5Q99717 465 aaKnown RBP5.1□□□□□ -1.59
CD44-225ENST00000527326 SIGMAR1Q99720 223 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 ARHGDIGQ99819 225 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 SEMA3CQ99985 751 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 HCAR1Q9BXC0 346 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 ZNF703Q9H7S9 590 aaPredicted RBP5.1□□□□□ -1.59
CD44-225ENST00000527326 ARL15Q9NXU5 204 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 SLC13A4Q9UKG4 626 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 HSF4Q9ULV5 492 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 NSG2Q9Y328 171 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 RHBDD3Q9Y3P4 386 aa5.1□□□□□ -1.59
CD44-225ENST00000527326 EVPLQ92817 2033 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 TRBV5-7A0A0A0MS05 114 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 TRAV1-1A0A0B4J248 108 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 IGKV6-21A0A0C4DH24 114 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 MEIS3P1A6NDR6 274 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 CEACAM18A8MTB9 384 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 H3BNC9 293 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 SLC17A2O00624 439 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 MTX2O75431 263 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 RBMXL2O75526 392 aaKnown RBP5.09□□□□□ -1.59
CD44-225ENST00000527326 TRAPPC6AO75865 159 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 IGLV3-25P01717 112 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 CTSDP07339 412 aaPredicted RBP5.09□□□□□ -1.59
CD44-225ENST00000527326 MRPL3P09001 348 aaKnown RBP5.09□□□□□ -1.59
CD44-225ENST00000527326 TACSTD2P09758 323 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 MPC1LP0DKB6 136 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 IRF1P10914 325 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 CCL2P13500 99 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 GNB3P16520 340 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 ZNF708P17019 499 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 ZNF43P17038 809 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 GDF1P27539 372 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 AOAHP28039 575 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 S100GP29377 79 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 TSPOP30536 169 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 GPR6P46095 362 aaPredicted RBP5.09□□□□□ -1.59
CD44-225ENST00000527326 GALR1P47211 349 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 THBS3P49746 956 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 HINT1P49773 126 aaPredicted RBP5.09□□□□□ -1.59
CD44-225ENST00000527326 SLC16A1P53985 500 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 MTCP1P56278 107 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 CLDN15P56746 228 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 FOXL2P58012 376 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 LCN6P62502 163 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 SSBP2P81877 361 aaPredicted RBP5.09□□□□□ -1.59
CD44-225ENST00000527326 EIF2B1Q14232 305 aaKnown RBP5.09□□□□□ -1.59
CD44-225ENST00000527326 EXT1Q16394 746 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 HIST3H3Q16695 136 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 MPV17LQ2QL34 196 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 STPG1Q5TH74 334 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 SP5Q6BEB4 398 aaPredicted RBP5.09□□□□□ -1.59
CD44-225ENST00000527326 SPSB3Q6PJ21 355 aa5.09□□□□□ -1.59
CD44-225ENST00000527326 TMEM182Q6ZP80 229 aaPredicted RBP5.09□□□□□ -1.59
CD44-225ENST00000527326 Q6ZWC4 215 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms