RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 TMEM249Q2WGJ8 235 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 Q6P435 159 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 METAP1DQ6UB28 335 aaPredicted RBP8.96□□□□□ -0.98
NEDD8-205ENST00000527046 DCDC5Q6ZRR9 648 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 SATL1Q86VE3 508 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 MKXQ8IYA7 352 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 OR10K1Q8NGX5 313 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 C12orf43Q96C57 262 aaKnown RBP8.96□□□□□ -0.98
NEDD8-205ENST00000527046 SDSLQ96GA7 329 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 C18orf12Q96KH6 178 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 GAFA1Q96PS6 74 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 CCL13Q99616 98 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 TCF7L1Q9HCS4 588 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 IL36GQ9NZH8 169 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 NLKQ9UBE8 527 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 POLDIP2Q9Y2S7 368 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 AKAP9Q99996 3911 aa8.96□□□□□ -0.98
NEDD8-205ENST00000527046 DOCK11Q5JSL3 2073 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 CELSR1Q9NYQ6 3014 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 ABCA1O95477 2261 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 TRAV38-1A0A0B4J264 116 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 TMEM82A0PJX8 343 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 RFPL4AA6NLU0 287 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 RFPL4AL1F8VTS6 287 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 SMAD7O15105 426 aaKnown RBP8.95□□□□□ -0.98
NEDD8-205ENST00000527046 LDLRAD4O15165 306 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 ZNF737O75373 536 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 ARL6IP5O75915 188 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 DUSP1P28562 367 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 PLA2G7Q13093 441 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 ZNF146Q15072 292 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 DGUOKQ16854 277 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 MICBQ29980 383 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 GDPGP1Q6ZNW5 385 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 BIVMQ86UB2 503 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 ANKRD13BQ86YJ7 626 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 FAM58AQ8N1B3 248 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 FAM216BQ8N7L0 139 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 TMEM104Q8NE00 496 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 OR51T1Q8NGJ9 327 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 TNFAIP8L1Q8WVP5 186 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 MSI2Q96DH6 328 aaKnown RBP8.95□□□□□ -0.98
NEDD8-205ENST00000527046 TIMD4Q96H15 378 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 SHARPINQ9H0F6 387 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 KCNK15Q9H427 330 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 GSX1Q9H4S2 264 aaPredicted RBP8.95□□□□□ -0.98
NEDD8-205ENST00000527046 ZNF665Q9H7R5 613 aa8.95□□□□□ -0.98
NEDD8-205ENST00000527046 POLR3KQ9Y2Y1 108 aaPredicted RBP8.95□□□□□ -0.98
NEDD8-205ENST00000527046 VPS13CQ709C8 3753 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 SMIM30A4D0T7 59 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 ISPDA4D126 451 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 TRAPPC2LH3BP13 241 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 LY6G6DO95868 133 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 KNG1P01042 644 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 INHBBP09529 407 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 VSIG8P0DPA2 414 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 CD99P14209 185 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 FOSL1P15407 271 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 LMO1P25800 156 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 PRDX2P32119 198 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 SDC2P34741 201 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 RPS19P39019 145 aaKnown RBP8.94□□□□□ -0.98
NEDD8-205ENST00000527046 RPL5P46777 297 aaKnown RBP8.94□□□□□ -0.98
NEDD8-205ENST00000527046 MTNR1BP49286 362 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 CAV3P56539 151 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 FGF12P61328 243 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 UNC119Q13432 240 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 PDCD1Q15116 288 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 WDR25Q64LD2 544 aaPredicted RBP8.94□□□□□ -0.98
NEDD8-205ENST00000527046 SIGIRRQ6IA17 410 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 OR10K2Q6IF99 312 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 GLIPR1L1Q6UWM5 242 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 C17orf107Q6ZR85 190 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 PEG10Q86TG7 708 aaKnown RBP8.94□□□□□ -0.98
NEDD8-205ENST00000527046 MUC20Q8N307 709 aaPredicted RBP8.94□□□□□ -0.98
NEDD8-205ENST00000527046 JAGN1Q8N5M9 183 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 NKAIN3Q8N8D7 197 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 ZNRF1Q8ND25 227 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 TBC1D15Q8TC07 691 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 GAL3ST1Q99999 423 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 UQCC2Q9BRT2 126 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 RHOFQ9HBH0 211 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 EXOSC4Q9NPD3 245 aaKnown RBP8.94□□□□□ -0.98
NEDD8-205ENST00000527046 MMP26Q9NRE1 261 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 CKLFQ9UBR5 152 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 MIOXQ9UGB7 285 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 SSR3Q9UNL2 185 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 ING4Q9UNL4 249 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 MRPS28Q9Y2Q9 187 aaKnown RBP8.94□□□□□ -0.98
NEDD8-205ENST00000527046 V9GY05 133 aa8.94□□□□□ -0.98
NEDD8-205ENST00000527046 FLNAP21333 2647 aaKnown RBP8.94□□□□□ -0.98
NEDD8-205ENST00000527046 A0A0B4J203 849 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 LOC100506127A0A0U1RQW1 187 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 TMEM14DPA8MWL7 114 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 A8MXK9 166 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 HAX1O00165 279 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 SLC17A2O00624 439 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 DVL1O14640 695 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 SIGLEC5O15389 551 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 MAGEB3O15480 346 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms