RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 ZNF626Q68DY1 528 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 TMEM42Q69YG0 159 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 LIAT1Q6ZQX7 453 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 ZNF555Q8NEP9 628 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 OR2T27Q8NH04 317 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 TFAP2CQ92754 450 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 NRIP2Q9BQI9 281 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 ADI1Q9BV57 179 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 PRRG3Q9BZD7 231 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 RAB18Q9NP72 206 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 ABCB9Q9NP78 766 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 GMPPBQ9Y5P6 360 aa11.45□□□□□ -0.58
CPSF1-201ENST00000526271 A0A0U1RQV5 110 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 NOS1APO75052 506 aaPredicted RBP11.44□□□□□ -0.58
CPSF1-201ENST00000526271 CAPGP40121 348 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 CDC42P60953 191 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 EMX1Q04741 257 aaPredicted RBP11.44□□□□□ -0.58
CPSF1-201ENST00000526271 SSX2Q16385 188 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 VAX1Q5SQQ9 334 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 SLC25A30Q5SVS4 291 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 BAIAP2L2Q6UXY1 529 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 MOB3CQ70IA8 216 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 CALHM1Q8IU99 346 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 CPOQ8IVL8 374 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 OR11H6Q8NGC7 330 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 OR5A2Q8NGI9 324 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 OR8J1Q8NGP2 316 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 TMEM163Q8TC26 289 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 OR51E1Q8TCB6 317 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 OTULINQ96BN8 352 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 TTTY10Q9BZA0 68 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 NIPAL2Q9H841 368 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 HEXA-AS1Q9H8Q6 139 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 GPR84Q9NQS5 396 aa11.44□□□□□ -0.58
CPSF1-201ENST00000526271 A0A1B0GTI1 187 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 A0A1W2PRX2 142 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 PQLC2LA1A4F0 135 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 A6NIN4 97 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 FAM90A22PA8MWA6 464 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 PRR23D1E9PI22 279 aaPredicted RBP11.43□□□□□ -0.58
CPSF1-201ENST00000526271 MAGEB4O15481 346 aaPredicted RBP11.43□□□□□ -0.58
CPSF1-201ENST00000526271 TTRP02766 147 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 TK1P04183 234 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 PRR23D2P0DMB1 279 aaPredicted RBP11.43□□□□□ -0.58
CPSF1-201ENST00000526271 GABRB1P18505 474 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 MAP2K3P46734 347 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 CAPZA1P52907 286 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 SNRPGP62308 76 aaKnown RBP11.43□□□□□ -0.58
CPSF1-201ENST00000526271 IL18R1Q13478 541 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 AADACL4Q5VUY2 407 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 ZNF691Q5VV52 312 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 IZUMO2Q6UXV1 221 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 FTMTQ8N4E7 242 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 ZNF561Q8N587 486 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 TCEANCQ8N8B7 351 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 ZNF454Q8N9F8 522 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 OR4S1Q8NGB4 309 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 CYGBQ8WWM9 190 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 PBOV1Q9GZY1 135 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 RASL12Q9NYN1 266 aa11.43□□□□□ -0.58
CPSF1-201ENST00000526271 IGKV1-27A0A075B6S5 117 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 TMEM82A0PJX8 343 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 OR5B21A6NL26 309 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 J3QT63 122 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 K7N7A8 449 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 M0R129 80 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 MMP23AO75900 390 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 AMY1AP04745 511 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 AMY2AP04746 511 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 ARG1P05089 322 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 PAICSP22234 425 aaKnown RBP11.42□□□□□ -0.58
CPSF1-201ENST00000526271 MPZP25189 248 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 HSPA13P48723 471 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 ISL1P61371 349 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 UTF1Q5T230 341 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 PLCXD3Q63HM9 321 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 Q6ZSR3 168 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 ANGPTL5Q86XS5 388 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 ENTHD1Q8IYW4 607 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 OR4F17Q8NGA8 305 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 RHOXF1Q8NHV9 184 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 ZNF671Q8TAW3 534 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 FAM81AQ8TBF8 368 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 OR4F4Q96R69 305 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 INPP5EQ9NRR6 644 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 GPR173Q9NS66 373 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 IL36RNQ9UBH0 155 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 PIGLQ9Y2B2 252 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 HSPE1-MOB4S4R3N1 261 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 RYR2Q92736 4967 aa11.42□□□□□ -0.58
CPSF1-201ENST00000526271 SH2D7A6NKC9 451 aaPredicted RBP11.41□□□□□ -0.58
CPSF1-201ENST00000526271 MPZL2O60487 215 aa11.41□□□□□ -0.58
CPSF1-201ENST00000526271 CLIC3O95833 236 aa11.41□□□□□ -0.58
CPSF1-201ENST00000526271 MRPL3P09001 348 aaKnown RBP11.41□□□□□ -0.58
CPSF1-201ENST00000526271 IGHV1-8P0DP01 117 aa11.41□□□□□ -0.58
CPSF1-201ENST00000526271 HAAOP46952 286 aa11.41□□□□□ -0.58
CPSF1-201ENST00000526271 DYNLT3P51808 116 aa11.41□□□□□ -0.58
CPSF1-201ENST00000526271 ROM1Q03395 351 aa11.41□□□□□ -0.58
CPSF1-201ENST00000526271 SMIM21Q3B7S5 101 aa11.41□□□□□ -0.58
CPSF1-201ENST00000526271 SLC35D3Q5M8T2 416 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms