RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 SLC37A2Q8TED4 501 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 FGF14Q92915 247 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 MRIQ9BWK5 157 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 TM2D1Q9BX74 207 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 QTRT1Q9BXR0 403 aaKnown RBP3.63□□□□□ -1.83
CD44-213ENST00000525209 PITPNM3Q9BZ71 974 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 ARV1Q9H2C2 271 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 SPNS1Q9H2V7 528 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 RNF167Q9H6Y7 350 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 VSIRQ9H7M9 311 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 NMNAT1Q9HAN9 279 aaPredicted RBP3.63□□□□□ -1.83
CD44-213ENST00000525209 MIEF1Q9NQG6 463 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 RBM22Q9NW64 420 aaKnown RBP eCLIP3.63□□□□□ -1.83
CD44-213ENST00000525209 TAS2R1Q9NYW7 299 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 THAP10Q9P2Z0 257 aaPredicted RBP3.63□□□□□ -1.83
CD44-213ENST00000525209 ANXA10Q9UJ72 324 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 POU2F3Q9UKI9 436 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 SLC35A3Q9Y2D2 325 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 SIGLEC9Q9Y336 463 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 PRELID3BQ9Y3B1 194 aa3.63□□□□□ -1.83
CD44-213ENST00000525209 PAPPAQ13219 1627 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 TDRD15B5MCY1 1934 aaKnown RBP3.62□□□□□ -1.83
CD44-213ENST00000525209 SMCHD1A6NHR9 2005 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 IGLV5-37A0A075B6J1 123 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 PRORSD1PA6NEY8 169 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 E9PLD3 99 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 F8W036 122 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 THY1P04216 161 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 FAM228BP0C875 321 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 CD37P11049 281 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 CD99P14209 185 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 CD1DP15813 335 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 PROZP22891 400 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 AK4P27144 223 aaPredicted RBP3.62□□□□□ -1.83
CD44-213ENST00000525209 S100GP29377 79 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 TSPOP30536 169 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 PFN2P35080 140 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 PPICP45877 212 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 GPR6P46095 362 aaPredicted RBP3.62□□□□□ -1.83
CD44-213ENST00000525209 RFX2P48378 723 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 APOC4P55056 127 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 LMO4P61968 165 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 NUTF2P61970 127 aaKnown RBP3.62□□□□□ -1.83
CD44-213ENST00000525209 PSG4Q00888 419 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 SLC10A7Q0GE19 358 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 SMAGPQ0VAQ4 97 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 PRSS8Q16651 343 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 ACSBG2Q5FVE4 666 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 KLF17Q5JT82 389 aaPredicted RBP3.62□□□□□ -1.83
CD44-213ENST00000525209 RPL13AP3Q6NVV1 102 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 ZFP1Q6P2D0 407 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 SFXN4Q6P4A7 337 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 XKRXQ6PP77 449 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 CHMP1BQ7LBR1 199 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 TMEM86BQ8N661 226 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 ZNF491Q8N8L2 437 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 WDSUB1Q8N9V3 476 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 OR4F15Q8NGB8 312 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 OR10G8Q8NGN5 311 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 OR1L8Q8NGR8 309 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 OR4X1Q8NH49 305 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 NT5CQ8TCD5 201 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 TNFAIP8L1Q8WVP5 186 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 TMEM230Q96A57 120 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 HAUS1Q96CS2 278 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 DCSTAMPQ9H295 470 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 FBXL15Q9H469 300 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 TMEM138Q9NPI0 162 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 KCNIP1Q9NZI2 227 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 THYN1Q9P016 225 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 OR1A1Q9P1Q5 309 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 ZNF257Q9Y2Q1 563 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 HSPB11Q9Y547 144 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 ARFGEF1Q9Y6D6 1849 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 COL4A3Q01955 1670 aa3.62□□□□□ -1.83
CD44-213ENST00000525209 TIAM2Q8IVF5 1701 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 SLIT3O75094 1523 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 IGHV1OR21-1A0A087WYE8 117 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 FAM159BA6NKW6 160 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 ZNF726A6NNF4 738 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 EVPLLA8MZ36 301 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 LINC01619G3V211 115 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 GPR75O95800 540 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 SLC25A27O95847 323 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 TSHBP01222 138 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 EDN1P05305 212 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 CRYGDP07320 174 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 SNRPCP09234 159 aaKnown RBP3.61□□□□□ -1.83
CD44-213ENST00000525209 SLC35G6P0C7Q6 338 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 PSG1P11464 419 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 SELEP16581 610 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 GGT1P19440 569 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 PLA2G5P39877 138 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 OR3A4PP47883 348 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 CSRP3P50461 194 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 RND2P52198 227 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 TCTAP57738 103 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 RAB2AP61019 212 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 RAB5BP61020 215 aa3.61□□□□□ -1.83
CD44-213ENST00000525209 NAA20P61599 178 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms