RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 ASB8Q9H765 288 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 CSNK1G1Q9HCP0 422 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 STOX2Q9P2F5 926 aaPredicted RBP3.89□□□□□ -1.79
SKP1-213ENST00000524288 MYEF2Q9P2K5 600 aaKnown RBP3.89□□□□□ -1.79
SKP1-213ENST00000524288 CLN8Q9UBY8 286 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 DNAJC15Q9Y5T4 150 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 ANKRD12Q6UB98 2062 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 ARHGAP21Q5T5U3 1957 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 SCN10AQ9Y5Y9 1956 aa3.89□□□□□ -1.79
SKP1-213ENST00000524288 VWA8A3KMH1 1905 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 PLAC8L1A1L4L8 177 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 ICOSLGO75144 302 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 CD160O95971 181 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 PTTG1O95997 202 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 HLA-DQB2P05538 268 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 RETP07949 1114 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 UBCP0CG48 685 aaKnown RBP3.88□□□□□ -1.79
SKP1-213ENST00000524288 UGT2B10P36537 528 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 GPX4P36969 197 aaPredicted RBP3.88□□□□□ -1.79
SKP1-213ENST00000524288 ETV6P41212 452 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 MAGEA2P43356 314 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 SERPINB10P48595 397 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 ZNF133P52736 654 aaPredicted RBP3.88□□□□□ -1.79
SKP1-213ENST00000524288 CDKN2DP55273 166 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 OR4D2P58180 307 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 GNA12Q03113 381 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 DOC2AQ14183 400 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 POU6F1Q14863 301 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 SPCS2Q15005 226 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 NEDD8Q15843 81 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 SYT6Q5T7P8 510 aaPredicted RBP3.88□□□□□ -1.79
SKP1-213ENST00000524288 ZNF691Q5VV52 312 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 CLEC6AQ6EIG7 209 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 TBPL2Q6SJ96 375 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 TAC4Q86UU9 113 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 TMEM86AQ8N2M4 240 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 ATPAF2Q8N5M1 289 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 ZNF321PQ8N8H1 164 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 OR5K1Q8NHB7 308 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 RNF138Q8WVD3 245 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 C17orf50Q8WW18 174 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 TMBIM1Q969X1 311 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 IMP4Q96G21 291 aaKnown RBP3.88□□□□□ -1.79
SKP1-213ENST00000524288 COL21A1Q96P44 957 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 ZNF382Q96SR6 550 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 PITX2Q99697 317 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 CHID1Q9BWS9 393 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 ULBP1Q9BZM6 244 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 DERL2Q9GZP9 239 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 NXF2Q9GZY0 626 aaKnown RBP3.88□□□□□ -1.79
SKP1-213ENST00000524288 CXCL16Q9H2A7 254 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 DUSP21Q9H596 190 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 MRPS30Q9NP92 439 aaKnown RBP3.88□□□□□ -1.79
SKP1-213ENST00000524288 TMEM9BQ9NQ34 198 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 MTCH1Q9NZJ7 389 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 OR12D3Q9UGF7 316 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 PIKFYVEQ9Y2I7 2098 aa3.88□□□□□ -1.79
SKP1-213ENST00000524288 NUP210Q8TEM1 1887 aaPredicted RBP3.88□□□□□ -1.79
SKP1-213ENST00000524288 COL4A6Q14031 1691 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 TRBV6-6A0A0A6YYG2 114 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 TRAV39A0A0B4J263 110 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 LOC285095A0A1B0GVY8 99 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 CLDN24A6NM45 220 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 ZNF99A8MXY4 864 aaPredicted RBP3.87□□□□□ -1.79
SKP1-213ENST00000524288 H0Y9J4 135 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 SMKR1H3BMG3 65 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 M0R3G1 203 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 HCRTO43612 131 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 SS18L1O75177 396 aaPredicted RBP3.87□□□□□ -1.79
SKP1-213ENST00000524288 FCN3O75636 299 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 SCELO95171 688 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 SERPINE2P07093 398 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 ELK4P28324 431 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 TGFBR2P37173 567 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 EIF2B2P49770 351 aaKnown RBP3.87□□□□□ -1.79
SKP1-213ENST00000524288 POLR2JP52435 117 aaKnown RBP3.87□□□□□ -1.79
SKP1-213ENST00000524288 SLC35A2P78381 396 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 IFITM3Q01628 133 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 CAPRIN1Q14444 709 aaKnown RBP3.87□□□□□ -1.79
SKP1-213ENST00000524288 OR4D1Q15615 310 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 KCNJ8Q15842 424 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 ZNF181Q2M3W8 571 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 UBE2UQ5VVX9 321 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 PLCXD3Q63HM9 321 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 CYB5R2Q6BCY4 276 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 CALHM3Q86XJ0 350 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 KRTAP11-1Q8IUC1 163 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 MICU2Q8IYU8 434 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 UMODL1-AS1Q8N2C9 162 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 RNF175Q8N4F7 328 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 ZNF555Q8NEP9 628 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 OR5K2Q8NHB8 316 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 BLOC1S5Q8TDH9 187 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 ZNF707Q96C28 371 aaPredicted RBP3.87□□□□□ -1.79
SKP1-213ENST00000524288 SMARCD1Q96GM5 515 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 PKMYT1Q99640 499 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 MICU1Q9BPX6 476 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 UGT2B28Q9BY64 529 aa3.87□□□□□ -1.79
SKP1-213ENST00000524288 SLIRPQ9GZT3 109 aaKnown RBP3.87□□□□□ -1.79
SKP1-213ENST00000524288 ING2Q9H160 280 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms