RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 SLAMF9Q96A28 289 aa15.17■□□□□ 0.02
PTP4A3-206ENST00000524028 CEP19Q96LK0 163 aa15.17■□□□□ 0.02
PTP4A3-206ENST00000524028 GABARAPL1Q9H0R8 117 aa15.17■□□□□ 0.02
PTP4A3-206ENST00000524028 SERTAD4Q9NUC0 356 aa15.17■□□□□ 0.02
PTP4A3-206ENST00000524028 WARS2Q9UGM6 360 aaKnown RBP15.17■□□□□ 0.02
PTP4A3-206ENST00000524028 SLC7A11Q9UPY5 501 aa15.17■□□□□ 0.02
PTP4A3-206ENST00000524028 TCF19Q9Y242 345 aa15.17■□□□□ 0.02
PTP4A3-206ENST00000524028 TMEM82A0PJX8 343 aa15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 A6NDX4 124 aa15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 METTL15A6NJ78 407 aa15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 SYT7O43581 403 aa15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 IGHV1-8P0DP01 117 aa15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 JUNBP17275 347 aaPredicted RBP15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 EDDM3BP56851 147 aa15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 FAM189A2Q15884 450 aa15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 SSX2Q16385 188 aa15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 SAMD5Q5TGI4 173 aa15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 ZNF626Q68DY1 528 aa15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 AMIGO2Q86SJ2 522 aa15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 TMEM219Q86XT9 240 aa15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 Q8N2B8 174 aa15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 PRSS35Q8N3Z0 413 aa15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 OR11H6Q8NGC7 330 aa15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 RNF166Q96A37 237 aaPredicted RBP15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 CIB1Q99828 191 aa15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 PLEKHA1Q9HB21 404 aa15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 IL36RNQ9UBH0 155 aa15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 TBL2Q9Y4P3 447 aaKnown RBP15.16■□□□□ 0.02
PTP4A3-206ENST00000524028 OR2T7P0C7T2 308 aa15.15■□□□□ 0.02
PTP4A3-206ENST00000524028 HTR1FP30939 366 aa15.15■□□□□ 0.02
PTP4A3-206ENST00000524028 KPRPQ5T749 579 aaPredicted RBP15.15■□□□□ 0.02
PTP4A3-206ENST00000524028 SLC25A26Q70HW3 274 aa15.15■□□□□ 0.02
PTP4A3-206ENST00000524028 ZDHHC13Q8IUH4 622 aa15.15■□□□□ 0.02
PTP4A3-206ENST00000524028 EGFL6Q8IUX8 553 aa15.15■□□□□ 0.02
PTP4A3-206ENST00000524028 OR8H2Q8N162 312 aa15.15■□□□□ 0.02
PTP4A3-206ENST00000524028 OR13D1Q8NGV5 346 aa15.15■□□□□ 0.02
PTP4A3-206ENST00000524028 MALSU1Q96EH3 234 aa15.15■□□□□ 0.02
PTP4A3-206ENST00000524028 CHST5Q9GZS9 411 aa15.15■□□□□ 0.02
PTP4A3-206ENST00000524028 IGHA1P01876 353 aa15.14■□□□□ 0.01
PTP4A3-206ENST00000524028 RBP4P02753 201 aa15.14■□□□□ 0.01
PTP4A3-206ENST00000524028 PRB2P02812 416 aaPredicted RBP15.14■□□□□ 0.01
PTP4A3-206ENST00000524028 CD28P10747 220 aa15.14■□□□□ 0.01
PTP4A3-206ENST00000524028 FUT6P51993 359 aa15.14■□□□□ 0.01
PTP4A3-206ENST00000524028 Q6ZS46 218 aa15.14■□□□□ 0.01
PTP4A3-206ENST00000524028 GDPD3Q7L5L3 318 aa15.14■□□□□ 0.01
PTP4A3-206ENST00000524028 RDH10Q8IZV5 341 aa15.14■□□□□ 0.01
PTP4A3-206ENST00000524028 TPRX1Q8N7U7 411 aa15.14■□□□□ 0.01
PTP4A3-206ENST00000524028 OR52N4Q8NGI2 321 aa15.14■□□□□ 0.01
PTP4A3-206ENST00000524028 WIPF2Q8TF74 440 aaPredicted RBP15.14■□□□□ 0.01
PTP4A3-206ENST00000524028 SNX22Q96L94 193 aa15.14■□□□□ 0.01
PTP4A3-206ENST00000524028 CDCA4Q9BXL8 241 aa15.14■□□□□ 0.01
PTP4A3-206ENST00000524028 AP4S1Q9Y587 144 aa15.14■□□□□ 0.01
PTP4A3-206ENST00000524028 SULT1C4O75897 302 aa15.13■□□□□ 0.01
PTP4A3-206ENST00000524028 FASP25445 335 aa15.13■□□□□ 0.01
PTP4A3-206ENST00000524028 KIR3DL2P43630 455 aa15.13■□□□□ 0.01
PTP4A3-206ENST00000524028 NPBWR2P48146 333 aa15.13■□□□□ 0.01
PTP4A3-206ENST00000524028 BNIP1Q12981 228 aa15.13■□□□□ 0.01
PTP4A3-206ENST00000524028 DYNC1I2Q13409 638 aaKnown RBP15.13■□□□□ 0.01
PTP4A3-206ENST00000524028 EDDM3AQ14507 147 aa15.13■□□□□ 0.01
PTP4A3-206ENST00000524028 CNN3Q15417 329 aaKnown RBP15.13■□□□□ 0.01
PTP4A3-206ENST00000524028 OR10H4Q8NGA5 316 aa15.13■□□□□ 0.01
PTP4A3-206ENST00000524028 RPS4Y2Q8TD47 263 aa15.13■□□□□ 0.01
PTP4A3-206ENST00000524028 FOXRED1Q96CU9 486 aaPredicted RBP15.13■□□□□ 0.01
PTP4A3-206ENST00000524028 ZNF714Q96N38 554 aa15.13■□□□□ 0.01
PTP4A3-206ENST00000524028 IGKV1-9A0A0C4DH69 117 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 LOC107986453A0A1B0GWG9 222 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 PSPNO60542 156 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 GATBO75879 557 aaKnown RBP15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 HAND1O96004 215 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 CALCBP10092 127 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 DUSP1P28562 367 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 ISL1P61371 349 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 ACTA2P62736 377 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 ACTG2P63267 376 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 ACTC1P68032 377 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 ACTA1P68133 377 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 ZNF85Q03923 595 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 MEF2CQ06413 473 aaPredicted RBP15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 NSUN5P1Q3KNT7 163 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 TP53I3Q53FA7 332 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 DTX3Q8N9I9 347 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 EMG1Q92979 244 aaKnown RBP15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 EME1Q96AY2 570 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 ADAT3Q96EY9 351 aaPredicted RBP15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 BORCS8Q96FH0 119 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 ADI1Q9BV57 179 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 CHST6Q9GZX3 395 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 SEBOXQ9HB31 216 aaPredicted RBP15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 ABCB10Q9NRK6 738 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 RBFOX1Q9NWB1 397 aaKnown RBP15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 HILPDAQ9Y5L2 63 aa15.12■□□□□ 0.01
PTP4A3-206ENST00000524028 ADARB2-AS1A8MUL3 147 aa15.11■□□□□ 0.01
PTP4A3-206ENST00000524028 FBXO24O75426 580 aa15.11■□□□□ 0.01
PTP4A3-206ENST00000524028 MMP23AO75900 390 aa15.11■□□□□ 0.01
PTP4A3-206ENST00000524028 BCL3P20749 454 aa15.11■□□□□ 0.01
PTP4A3-206ENST00000524028 DYNLT3P51808 116 aa15.11■□□□□ 0.01
PTP4A3-206ENST00000524028 BLCAPP62952 87 aa15.11■□□□□ 0.01
PTP4A3-206ENST00000524028 ZNF91Q05481 1191 aa15.11■□□□□ 0.01
PTP4A3-206ENST00000524028 GRK1Q15835 563 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms