RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 KIAA2026Q5HYC2 2103 aa9.19□□□□□ -0.94
SDCBP-211ENST00000523441 hADV38S2A0JD32 116 aa9.18□□□□□ -0.94
SDCBP-211ENST00000523441 GASTP01350 101 aa9.18□□□□□ -0.94
SDCBP-211ENST00000523441 RPLP1P05386 114 aaKnown RBP9.18□□□□□ -0.94
SDCBP-211ENST00000523441 FABP3P05413 133 aa9.18□□□□□ -0.94
SDCBP-211ENST00000523441 COX4I1P13073 169 aa9.18□□□□□ -0.94
SDCBP-211ENST00000523441 ZNF3P17036 446 aa9.18□□□□□ -0.94
SDCBP-211ENST00000523441 CHATP28329 748 aa9.18□□□□□ -0.94
SDCBP-211ENST00000523441 ARHGDIBP52566 201 aa9.18□□□□□ -0.94
SDCBP-211ENST00000523441 PSMA6P60900 246 aaKnown RBP9.18□□□□□ -0.94
SDCBP-211ENST00000523441 RIPPLY1Q0D2K3 151 aa9.18□□□□□ -0.94
SDCBP-211ENST00000523441 HES1Q14469 280 aa9.18□□□□□ -0.94
SDCBP-211ENST00000523441 GRK1Q15835 563 aa9.18□□□□□ -0.94
SDCBP-211ENST00000523441 RPL13AP3Q6NVV1 102 aa9.18□□□□□ -0.94
SDCBP-211ENST00000523441 ZNF573Q86YE8 665 aa9.18□□□□□ -0.94
SDCBP-211ENST00000523441 RP9Q8TA86 221 aaKnown RBP9.18□□□□□ -0.94
SDCBP-211ENST00000523441 SLAMF9Q96A28 289 aa9.18□□□□□ -0.94
SDCBP-211ENST00000523441 PYURFQ96I23 114 aa9.18□□□□□ -0.94
SDCBP-211ENST00000523441 NRIP2Q9BQI9 281 aa9.18□□□□□ -0.94
SDCBP-211ENST00000523441 BTBD10Q9BSF8 475 aa9.18□□□□□ -0.94
SDCBP-211ENST00000523441 ENPP5Q9UJA9 477 aa9.18□□□□□ -0.94
SDCBP-211ENST00000523441 HYDINQ4G0P3 5121 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 FAM230AA0A1W2PPH8 454 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 TMEM82A0PJX8 343 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 LEUTXA8MZ59 168 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 F8VVB4 439 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 F8VWA3 439 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 TOR1AO14656 332 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 IGHV3-7P01780 117 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 IGHA1P01876 353 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 RBP4P02753 201 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 DUSP1P28562 367 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 BLVRAP53004 296 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 SLC35B1P78383 322 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 OR2T33Q8NG76 320 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 CHPT1Q8WUD6 406 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 HOPXQ9BPY8 73 aaPredicted RBP9.17□□□□□ -0.94
SDCBP-211ENST00000523441 ZMAT4Q9H898 229 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 ZFP57Q9NU63 452 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 FGFR1OP2Q9NVK5 253 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 IL36RNQ9UBH0 155 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 SCOCQ9UIL1 159 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 POLDIP2Q9Y2S7 368 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 MOB4Q9Y3A3 225 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 HSPE1-MOB4S4R3N1 261 aa9.17□□□□□ -0.94
SDCBP-211ENST00000523441 TMEM269A0A1B0GVZ9 245 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 ARRDC5A6NEK1 342 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 TNFRSF11BO00300 401 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 ZNF737O75373 536 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 CDK2P24941 298 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 GDNFP39905 211 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 GP2P55259 537 aaKnown RBP9.16□□□□□ -0.94
SDCBP-211ENST00000523441 PSME3P61289 254 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 RPS7P62081 194 aaKnown RBP9.16□□□□□ -0.94
SDCBP-211ENST00000523441 ZBTB49Q6ZSB9 765 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 SLC35E3Q7Z769 313 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 OR8H2Q8N162 312 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 AQP11Q8NBQ7 271 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 OR52N4Q8NGI2 321 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 OR56B4Q8NH76 319 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 OTOSQ8NHW6 89 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 TEAD3Q99594 435 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 PBOV1Q9GZY1 135 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 DCLRE1BQ9H816 532 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 EFCAB1Q9HAE3 211 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 ZNF286AQ9HBT8 521 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 IL20Q9NYY1 176 aa9.16□□□□□ -0.94
SDCBP-211ENST00000523441 LINC01548A6NM66 108 aa9.15□□□□□ -0.94
SDCBP-211ENST00000523441 CCNB2O95067 398 aa9.15□□□□□ -0.94
SDCBP-211ENST00000523441 MRPL3P09001 348 aaKnown RBP9.15□□□□□ -0.94
SDCBP-211ENST00000523441 FRMD6-AS1P0C7T7 363 aa9.15□□□□□ -0.94
SDCBP-211ENST00000523441 TMEM11P17152 192 aa9.15□□□□□ -0.94
SDCBP-211ENST00000523441 NFYBP25208 207 aa9.15□□□□□ -0.94
SDCBP-211ENST00000523441 PEX2P28328 305 aa9.15□□□□□ -0.94
SDCBP-211ENST00000523441 MNDAP41218 407 aa9.15□□□□□ -0.94
SDCBP-211ENST00000523441 MEF2CQ06413 473 aaPredicted RBP9.15□□□□□ -0.94
SDCBP-211ENST00000523441 TPTE2P1Q5T6R2 138 aa9.15□□□□□ -0.94
SDCBP-211ENST00000523441 CGB2Q6NT52 195 aa9.15□□□□□ -0.94
SDCBP-211ENST00000523441 RASSF6Q6ZTQ3 369 aa9.15□□□□□ -0.94
SDCBP-211ENST00000523441 TRPM8Q7Z2W7 1104 aa9.15□□□□□ -0.94
SDCBP-211ENST00000523441 ZNF596Q8TC21 504 aa9.15□□□□□ -0.94
SDCBP-211ENST00000523441 EMG1Q92979 244 aaKnown RBP9.15□□□□□ -0.94
SDCBP-211ENST00000523441 CADM1Q9BY67 442 aaKnown RBP9.15□□□□□ -0.94
SDCBP-211ENST00000523441 HES4Q9HCC6 221 aa9.15□□□□□ -0.94
SDCBP-211ENST00000523441 MRGBPQ9NV56 204 aa9.15□□□□□ -0.94
SDCBP-211ENST00000523441 LAMP5Q9UJQ1 280 aa9.15□□□□□ -0.94
SDCBP-211ENST00000523441 LINC00312Q9Y6C7 94 aa9.15□□□□□ -0.94
SDCBP-211ENST00000523441 STARD9Q9P2P6 4700 aa9.15□□□□□ -0.95
SDCBP-211ENST00000523441 PQLC2LA1A4F0 135 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 H3BN98 237 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 M0QZK8 103 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 SIRPB1O00241 398 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 NOS1APO75052 506 aaPredicted RBP9.14□□□□□ -0.95
SDCBP-211ENST00000523441 HAND1O96004 215 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 SEMG1P04279 462 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 FAM106CPP0CH98 169 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 CEACAM3P40198 252 aa9.14□□□□□ -0.95
SDCBP-211ENST00000523441 MFGE8Q08431 387 aaPredicted RBP9.14□□□□□ -0.95
SDCBP-211ENST00000523441 KPNB1Q14974 876 aaKnown RBP9.14□□□□□ -0.95
SDCBP-211ENST00000523441 SRSF7Q16629 238 aaKnown RBP eCLIP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms