RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 NOXO1Q8NFA2 376 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 BPIFB6Q8NFQ5 453 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 OR4Q3Q8NH05 313 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 PFN4Q8NHR9 129 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 FAM81AQ8TBF8 368 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 PTP4A1Q93096 173 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 MYDGFQ969H8 173 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 DGCR14Q96DF8 476 aaKnown RBP5.32□□□□□ -1.56
SDCBP-210ENST00000522843 EGLN3Q9H6Z9 239 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 FGF20Q9NP95 211 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-210ENST00000522843 NANSQ9NR45 359 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 CMC2Q9NRP2 79 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 IMPAD1Q9NX62 359 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 DNAJB11Q9UBS4 358 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 EXOGQ9Y2C4 368 aaKnown RBP5.32□□□□□ -1.56
SDCBP-210ENST00000522843 KPTNQ9Y664 436 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 KMT2AQ03164 3969 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 A0A1B0GWJ7 208 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 DVL1O14640 695 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 RGS10O43665 173 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 ANGPTL7O43827 346 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 ENTPD6O75354 484 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 TRMUO75648 421 aaKnown RBP5.31□□□□□ -1.56
SDCBP-210ENST00000522843 CH25HO95992 272 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 IGHG1P01857 330 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 HLA-DPB1P04440 258 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 CDK1P06493 297 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 CD14P08571 375 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 LYL1P12980 280 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 DCKP27707 260 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 POU1F1P28069 291 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 LAP3P28838 519 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 ZNF84P51523 738 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 SLC25A1P53007 311 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 RAB40BQ12829 278 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 ENDOGQ14249 297 aaKnown RBP5.31□□□□□ -1.56
SDCBP-210ENST00000522843 MPPED2Q15777 294 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 FAM27BQ5VT28 67 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 UBE2UQ5VVX9 321 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 PRAMEF6Q5VXH4 476 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 GPR139Q6DWJ6 353 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 SFRP4Q6FHJ7 346 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-210ENST00000522843 OR2T2Q6IF00 324 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 HCP5Q6MZN7 132 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 SLC25A47Q6Q0C1 308 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 ARL9Q6T311 187 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 UNQ6126/PRO20091Q6UXV3 157 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 FAM122BQ7Z309 247 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 C10orf53Q8N6V4 93 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 TCEANCQ8N8B7 351 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 NPEPL1Q8NDH3 523 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 LY6G5BQ8NDX9 201 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 OR8G5Q8NG78 346 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 OR52L1Q8NGH7 329 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 CNIH3Q8TBE1 160 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 NPRL2Q8WTW4 380 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 ZNF582Q96NG8 517 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-210ENST00000522843 SSX3Q99909 188 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 KRTAP2-2Q9BYT5 123 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 NMNAT2Q9BZQ4 307 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 TINAGL1Q9GZM7 467 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-210ENST00000522843 ELOVL3Q9HB03 270 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 PAK1IP1Q9NWT1 392 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-210ENST00000522843 TVP23BQ9NYZ1 205 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 ERVK-18Q9QC07 812 aa5.31□□□□□ -1.56
SDCBP-210ENST00000522843 WARS2Q9UGM6 360 aaKnown RBP5.31□□□□□ -1.56
SDCBP-210ENST00000522843 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.31□□□□□ -1.56
SDCBP-210ENST00000522843 CAB39Q9Y376 341 aaPredicted RBP5.31□□□□□ -1.56
SDCBP-210ENST00000522843 A0A1B0GVI7 797 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 MEIOCA2RUB1 952 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 LRRC30A6NM36 301 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 PTGES3LE9PB15 166 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 M0QYG6 137 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 LGALS8O00214 317 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 ADAM20O43506 726 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 RNF13O43567 381 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 SOX14O95416 240 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 DUS4LO95620 317 aaKnown RBP5.3□□□□□ -1.56
SDCBP-210ENST00000522843 LHBP01229 141 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 IFNGP01579 166 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 HIST1H2ABP04908 130 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 BTF3P20290 206 aaKnown RBP5.3□□□□□ -1.56
SDCBP-210ENST00000522843 SLC2A5P22732 501 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 HTR1FP30939 366 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 FMO3P31513 532 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 CENPAP49450 140 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 SRP9P49458 86 aaKnown RBP5.3□□□□□ -1.56
SDCBP-210ENST00000522843 BMXP51813 675 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 SSBP2P81877 361 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-210ENST00000522843 ACSM1Q08AH1 577 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 ST3GAL4Q11206 333 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 TBCEQ15813 527 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-210ENST00000522843 SGCAQ16586 387 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 SLC35D3Q5M8T2 416 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 ATPAF1Q5TC12 328 aaPredicted RBP5.3□□□□□ -1.56
SDCBP-210ENST00000522843 FOXL2NBQ6ZUU3 175 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 KCTD8Q6ZWB6 473 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 MEPCEQ7L2J0 689 aaKnown RBP5.3□□□□□ -1.56
SDCBP-210ENST00000522843 HIST3H2AQ7L7L0 130 aa5.3□□□□□ -1.56
SDCBP-210ENST00000522843 GID4Q8IVV7 300 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms