RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 UBALD2Q8IYN6 164 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 TMEM52Q8NDY8 209 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 ASB5Q8WWX0 329 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 ADGRG7Q96K78 797 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 NAA60Q9H7X0 242 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 KLHDC2Q9Y2U9 406 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 CLN5O75503 358 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 IL2RAP01589 272 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 ZP1P60852 638 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 ZNF658BQ4V348 819 aaPredicted RBP12.24□□□□□ -0.45
SYNPO-205ENST00000522122 PHYHD1Q5SRE7 291 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 OR8B12Q8NGG6 310 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 GPX7Q96SL4 187 aaPredicted RBP12.24□□□□□ -0.45
SYNPO-205ENST00000522122 MTCH1Q9NZJ7 389 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 A0A1W2PPQ1 181 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 CRHP06850 196 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 METTL15P1P0C7V9 234 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 TAS2R45P59539 299 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 SPATA46Q5T0L3 261 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 FAM109BQ6ICB4 259 aaPredicted RBP12.24□□□□□ -0.45
SYNPO-205ENST00000522122 NPDC1Q9NQX5 325 aaPredicted RBP12.24□□□□□ -0.45
SYNPO-205ENST00000522122 FBXL17Q9UF56 701 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 FAM96BQ9Y3D0 163 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 WSB1Q9Y6I7 421 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 AQP7P3A6NL99 342 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 AQP7O14520 342 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 TO15178 435 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 ONECUT2O95948 504 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 IGKV1D-16P01601 117 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 ASCL1P50553 236 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 OR2T2Q6IF00 324 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 ZNF574Q6ZN55 896 aaPredicted RBP12.23□□□□□ -0.45
SYNPO-205ENST00000522122 CLDN23Q96B33 292 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 IFT22Q9H7X7 185 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 GAR1Q9NY12 217 aaKnown RBP12.23□□□□□ -0.45
SYNPO-205ENST00000522122 OR10J4P0C629 311 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 NQO2P16083 231 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 CLEC12BQ2HXU8 276 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 TUSC1Q2TAM9 212 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 SLC25A42Q86VD7 318 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 FAM173AQ9BQD7 235 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 SOX7Q9BT81 388 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 PROCRQ9UNN8 238 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 CHRNB4P30926 498 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 EFNB2P52799 333 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 TRA2AQ13595 282 aaKnown RBP eCLIP12.23□□□□□ -0.45
SYNPO-205ENST00000522122 ZNF429Q86V71 674 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 TXN2Q99757 166 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 NMES1Q9C002 83 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 CRISPLD2Q9H0B8 497 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 KCNE5Q9UJ90 142 aa12.23□□□□□ -0.45
SYNPO-205ENST00000522122 KRASP01116 189 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 MESP2Q0VG99 397 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 PABPC1L2AQ5JQF8 200 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 RPL7L1Q6DKI1 246 aaKnown RBP12.22□□□□□ -0.45
SYNPO-205ENST00000522122 OR2C3Q8N628 320 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 RPS4Y2Q8TD47 263 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 SAT2Q96F10 170 aaPredicted RBP12.22□□□□□ -0.45
SYNPO-205ENST00000522122 TAAR6Q96RI8 345 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 ZNF426Q9BUY5 554 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 CACFD1Q9UGQ2 172 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 ERRFI1Q9UJM3 462 aaPredicted RBP12.22□□□□□ -0.45
SYNPO-205ENST00000522122 V9GYS6 101 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 PIKFYVEQ9Y2I7 2098 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 DOCK3Q8IZD9 2030 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 J3QRE1 110 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 ABCD4O14678 606 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 EFEMP2O95967 443 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 UBE2G1P62253 170 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 SURF2Q15527 256 aaPredicted RBP12.22□□□□□ -0.45
SYNPO-205ENST00000522122 SMIM21Q3B7S5 101 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 OR4D10Q8NGI6 311 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 P4HTMQ9NXG6 502 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 TNFSF18Q9UNG2 199 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 LIPT2A6NK58 231 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 SOCS1O15524 211 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 GALR2O43603 387 aaPredicted RBP12.22□□□□□ -0.45
SYNPO-205ENST00000522122 OR5AC1P0C628 307 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 DEFA4P12838 97 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 ZBTB25P24278 435 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 IL13RA2Q14627 380 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 Q8IYB0 196 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 OR5C1Q8NGR4 320 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 CCDC187A0A096LP49 1063 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 PIN1P1O15428 100 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 TMEM33P57088 247 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 ZNF816Q0VGE8 651 aaPredicted RBP12.22□□□□□ -0.45
SYNPO-205ENST00000522122 ZNF273Q14593 569 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 CLEC18BQ6UXF7 455 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 FAM58AQ8N1B3 248 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 MRPS24Q96EL2 167 aaKnown RBP12.22□□□□□ -0.45
SYNPO-205ENST00000522122 RAB40CQ96S21 281 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 SLC35B3Q9H1N7 401 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 WBP1LQ9NX94 342 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 NPTNQ9Y639 398 aa12.22□□□□□ -0.45
SYNPO-205ENST00000522122 ADAM20O43506 726 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 TNFSF15O95150 251 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 SLC25A6P12236 298 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 RAB13P51153 203 aa12.21□□□□□ -0.45
SYNPO-205ENST00000522122 DCAF12L2Q5VW00 463 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms