RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 ERVK11-1P61568 191 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 BTG1P62324 171 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 PPP3R1P63098 170 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 PDZK1IP1Q13113 114 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 HNRNPA0Q13151 305 aaKnown RBP6.99□□□□□ -1.29
VPS13B-210ENST00000521932 HSD17B12Q53GQ0 312 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 FAM27D1Q5T7N8 215 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 TEX36Q5VZQ5 186 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 ASCL4Q6XD76 172 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 GDPGP1Q6ZNW5 385 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 RNF144BQ7Z419 303 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 PEG10Q86TG7 708 aaKnown RBP6.99□□□□□ -1.29
VPS13B-210ENST00000521932 LRRTM1Q86UE6 522 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 ANGPTL5Q86XS5 388 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 MKXQ8IYA7 352 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 SAXO1Q8IYX7 474 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 POC1AQ8NBT0 407 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 OR13F1Q8NGS4 319 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 TRMT10AQ8TBZ6 339 aaKnown RBP6.99□□□□□ -1.29
VPS13B-210ENST00000521932 NPRL2Q8WTW4 380 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 RAB1CQ92928 201 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 YIPF6Q96EC8 236 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 CPNE2Q96FN4 548 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-210ENST00000521932 TIMD4Q96H15 378 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 KRTAP4-2Q9BYR5 136 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 RHOFQ9HBH0 211 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 TMEM165Q9HC07 324 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 TCF7L1Q9HCS4 588 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 SNTG1Q9NSN8 517 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 RASL12Q9NYN1 266 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 MTCH1Q9NZJ7 389 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 STUB1Q9UNE7 303 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 POLDIP2Q9Y2S7 368 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 PPIAL4AQ9Y536 164 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 DYSFO75923 2080 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 TANC2Q9HCD6 1990 aa6.99□□□□□ -1.29
VPS13B-210ENST00000521932 PRRC2AP48634 2157 aaKnown RBP6.98□□□□□ -1.29
VPS13B-210ENST00000521932 TRAV1-2A0A0B4J238 106 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 hCG_1807616A0A1W2PRN6 198 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 NUDT19A8MXV4 375 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 C22orf46C9J442 243 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-210ENST00000521932 PPIHO43447 177 aaKnown RBP6.98□□□□□ -1.29
VPS13B-210ENST00000521932 AKR7A2O43488 359 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 SYNGR1O43759 233 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 AMY2AP04746 511 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 HCKP08631 526 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 INHBBP09529 407 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 MUC1P15941 1255 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-210ENST00000521932 ADRA2CP18825 462 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 AMY2BP19961 511 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 CPT2P23786 658 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 ZNF93P35789 620 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-210ENST00000521932 MDH2P40926 338 aaKnown RBP6.98□□□□□ -1.29
VPS13B-210ENST00000521932 PTGFRP43088 359 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 LOXL1Q08397 574 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-210ENST00000521932 CARTPTQ16568 116 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 TIMM50Q3ZCQ8 353 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 ZNF404Q494X3 552 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 TMEM155Q4W5P6 130 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 DDI2Q5TDH0 399 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 NKAIN3Q8N8D7 197 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 ZSCAN4Q8NAM6 433 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-210ENST00000521932 Q8NFD4 153 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 PXT1Q8NFP0 134 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 OR51F2Q8NH61 342 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 LRRC29Q8WV35 223 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 C12orf43Q96C57 262 aaKnown RBP6.98□□□□□ -1.29
VPS13B-210ENST00000521932 FOXRED1Q96CU9 486 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-210ENST00000521932 SPACA5Q96QH8 159 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 NRIP2Q9BQI9 281 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 REG4Q9BYZ8 158 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 OR51E2Q9H255 320 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 METTL17Q9H7H0 456 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-210ENST00000521932 HES4Q9HCC6 221 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 SMURF1Q9HCE7 757 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 TXNL4BQ9NX01 149 aaKnown RBP6.98□□□□□ -1.29
VPS13B-210ENST00000521932 PLA2G2DQ9UNK4 145 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 SSR3Q9UNL2 185 aa6.98□□□□□ -1.29
VPS13B-210ENST00000521932 OTOGQ6ZRI0 2925 aa6.97□□□□□ -1.29
VPS13B-210ENST00000521932 TRAV38-1A0A0B4J264 116 aa6.97□□□□□ -1.29
VPS13B-210ENST00000521932 IGKV1-12A0A0C4DH73 117 aa6.97□□□□□ -1.29
VPS13B-210ENST00000521932 OOEPA6NGQ2 149 aa6.97□□□□□ -1.29
VPS13B-210ENST00000521932 LGALS8O00214 317 aa6.97□□□□□ -1.29
VPS13B-210ENST00000521932 WNT9BO14905 357 aa6.97□□□□□ -1.29
VPS13B-210ENST00000521932 SPRY1O43609 319 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-210ENST00000521932 NDUFA2O43678 99 aa6.97□□□□□ -1.29
VPS13B-210ENST00000521932 KDM4BO94953 1096 aa6.97□□□□□ -1.29
VPS13B-210ENST00000521932 IGKV1D-12P01611 117 aa6.97□□□□□ -1.29
VPS13B-210ENST00000521932 EGR1P18146 543 aa6.97□□□□□ -1.29
VPS13B-210ENST00000521932 USF1P22415 310 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-210ENST00000521932 GLRA1P23415 457 aa6.97□□□□□ -1.29
VPS13B-210ENST00000521932 GADD45AP24522 165 aa6.97□□□□□ -1.29
VPS13B-210ENST00000521932 CALRP27797 417 aaKnown RBP6.97□□□□□ -1.29
VPS13B-210ENST00000521932 RPL5P46777 297 aaKnown RBP6.97□□□□□ -1.29
VPS13B-210ENST00000521932 PSMD7P51665 324 aa6.97□□□□□ -1.29
VPS13B-210ENST00000521932 HOXA4Q00056 320 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-210ENST00000521932 NOTCH2Q04721 2471 aa6.97□□□□□ -1.29
VPS13B-210ENST00000521932 ZMYND11Q15326 602 aa6.97□□□□□ -1.29
VPS13B-210ENST00000521932 KCNJ8Q15842 424 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms