RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 SCN1AP35498 2009 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 NLRC5Q86WI3 1866 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 IGLV4-69A0A075B6H9 119 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 IGHV2OR16-5A0A0B4J2B6 119 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 IGHV1OR15-9A0A0B4J2B8 117 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 CCL15-CCL14A0A0B4J2E2 113 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 C5orf63A6NC05 138 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 CENPXA8MT69 81 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 ZNF705GA8MUZ8 300 aaPredicted RBP2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 RAD51BO15315 384 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 RAD1O60671 282 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 IGKV1D-16P01601 117 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 CCDC172P0C7W6 258 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 HOXB8P17481 243 aaPredicted RBP2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 PGAM1P18669 254 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 BGNP21810 368 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 CXCR1P25024 350 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 NUP62P37198 522 aaPredicted RBP2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 RAB7AP51149 207 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 CDKN2DP55273 166 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 RPL31P62899 125 aaKnown RBP2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 GNGT1P63211 74 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 TNNC1P63316 161 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 SLC35B1P78383 322 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 ITGB3BPQ13352 177 aaPredicted RBP2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 DYNC1I2Q13409 638 aaKnown RBP2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 SPA17Q15506 151 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 TNXAQ16473 311 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 PSG3Q16557 428 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 CCL15Q16663 113 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 ATP6V1FQ16864 119 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 TFDP3Q5H9I0 405 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 OR2T5Q6IEZ7 315 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 ZFP2Q6ZN57 461 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 NDUFAF7Q7L592 441 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 SH2D6Q7Z4S9 175 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 NKAIN4Q8IVV8 208 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 PGAM4Q8N0Y7 254 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 RNF10Q8N5U6 811 aaKnown RBP2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 SPERTQ8NA61 448 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 OR2T29Q8NH02 315 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 OR52P1PQ8NH57 321 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 OR51A7Q8NH64 312 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 OR10G6Q8NH81 332 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 LILRB4Q8NHJ6 448 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 C17orf50Q8WW18 174 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 TMEM234Q8WY98 164 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 FAM131CQ96AQ9 280 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 RBMXL1Q96E39 390 aaKnown RBP2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 MSANTD3Q96H12 275 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 ATP6V1G3Q96LB4 118 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 ZNF488Q96MN9 340 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 MBOAT7Q96N66 472 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 TEAD3Q99594 435 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 HINT2Q9BX68 163 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 PRRG3Q9BZD7 231 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 STMN4Q9H169 189 aaPredicted RBP2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 SYT4Q9H2B2 425 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 ARV1Q9H2C2 271 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 TMBIM4Q9HC24 238 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 MYOZ1Q9NP98 299 aaPredicted RBP2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 FAM49BQ9NUQ9 324 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 CLEC2DQ9UHP7 191 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 FLVCR2Q9UPI3 526 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 STK38LQ9Y2H1 464 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 C2orf16Q68DN1 1984 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 NOTCH2Q04721 2471 aa2.08□□□□□ -2.08
HMGN1P28-201ENST00000521340 COL27A1Q8IZC6 1860 aaPredicted RBP2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 CHD5Q8TDI0 1954 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 COL4A5P29400 1685 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 COL4A4P53420 1690 aaPredicted RBP2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 A0A087X0T9 212 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 IGKV6-21A0A0C4DH24 114 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 OR6C74A6NCV1 312 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 SYCE1LA8MT33 242 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 ZNF879B4DU55 563 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 F8VZ95 297 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 PGRMC1O00264 195 aaKnown RBP2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 TAAR5O14804 337 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 SC5DO75845 299 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 FAM107AO95990 144 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 PTTG1O95997 202 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 FAM228BP0C875 321 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 GOLGA8HP0CJ92 632 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 PSMC3P17980 439 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 GALR1P47211 349 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 KCNJ3P48549 501 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 PRLHRP49683 370 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 MRPS25P82663 173 aaKnown RBP2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 NDUFAF6Q330K2 333 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 TCEAL5Q5H9L2 206 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 CPTPQ5TA50 214 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 ZNF691Q5VV52 312 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 DEGS2Q6QHC5 323 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 CD300LGQ6UXG3 332 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 KRTAP5-2Q701N4 177 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 LINC01551Q86U37 167 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 TMEM25Q86YD3 366 aa2.07□□□□□ -2.08
HMGN1P28-201ENST00000521340 RIMKLAQ8IXN7 391 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms