RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 PRAMEF20Q5VT98 475 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 NOXO1Q8NFA2 376 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 OR2AE1Q8NHA4 323 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 SNIP1Q8TAD8 396 aaKnown RBP11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 BORCS8Q96FH0 119 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 LURAP1Q96LR2 239 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 METTL9Q9H1A3 318 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 ALKBH4Q9NXW9 302 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 IGKV1-9A0A0C4DH69 117 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 OR5H15A6NDH6 313 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 LCATP04180 440 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 LYL1P12980 280 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 GABRG2P18507 467 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 CMTM1Q8IZ96 169 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 ST8SIA1Q92185 356 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 GPHA2Q96T91 129 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 RANBP2P49792 3224 aaKnown RBP11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 A0A1W2PQD3 144 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 C5orf63A6NC05 138 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 SEC14L6B5MCN3 397 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 FTCDNL1E5RQL4 147 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 RPS2P15880 293 aaKnown RBP11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 ECI1P42126 302 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 VEGFBP49765 207 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 RNF4P78317 190 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 OR2C3Q8N628 320 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 CCDC71LQ8N9Z2 235 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 OR5C1Q8NGR4 320 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 SNX22Q96L94 193 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 GNRHR2Q96P88 292 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 MESP1Q9BRJ9 268 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 SLC2A9Q9NRM0 540 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 SLCO1B1Q9Y6L6 691 aa11.24□□□□□ -0.61
TRAPPC9-208ENST00000520857 TRBV11-1A0A0K0K1C0 115 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 CRYM-AS1A6NIL9 109 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 DBHP09172 617 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 HTR5AP47898 357 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 CSNK1A1P48729 337 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 RPS18P62269 152 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 MRPS34P82930 218 aaKnown RBP11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 EWSR1Q01844 656 aaKnown RBP eCLIP11.23□□□□□ -0.612e-6■■■■□ 21.2
TRAPPC9-208ENST00000520857 UBE2V2Q15819 145 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 CPNE4Q96A23 557 aaPredicted RBP11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 TVP23CQ96ET8 276 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 BTBD17A6NE02 478 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 LIPT2A6NK58 231 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 HSPB6O14558 160 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 HLA-HP01893 362 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 MYF5P13349 255 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 PAX6P26367 422 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 STARD6P59095 220 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 RND3P61587 244 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 LCN15Q6UWW0 184 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 LYPD6Q86Y78 171 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 Q8WTZ3 238 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 SHDQ96IW2 340 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 DOCK8Q8NF50 2099 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 OR1D5P58170 312 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 HEPN1Q6WQI6 88 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 OR5T1Q8NG75 326 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 ZNF286AQ9HBT8 521 aa11.23□□□□□ -0.61
TRAPPC9-208ENST00000520857 IGHV3-15A0A0B4J1V0 119 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 ANKUB1A6NFN9 424 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 IFNA10P01566 189 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 ZNF133P52736 654 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 GRB2P62993 217 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 RTL6Q6ICC9 239 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 C7orf61Q8IZ16 206 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 NECAP1Q8NC96 275 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 ZDHHC8Q9ULC8 765 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 ESPL1Q14674 2120 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 CCDC187A0A096LP49 1063 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 M0R135 149 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 MSTNO14793 375 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 OR2J2O76002 312 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 IGHMP01871 453 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 LIAT1Q6ZQX7 453 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 C1orf87Q8N0U7 546 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 INTS12Q96CB8 462 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 ZNF799Q96GE5 643 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 FAM210BQ96KR6 192 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 C1orf147Q96MC9 270 aaPredicted RBP11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 GAB2Q9UQC2 676 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 HDGFL3Q9Y3E1 203 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 NKX2-6A6NCS4 301 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 FAM157AC9JC47 383 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 NPIPA2E9PIF3 369 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 NPIPA3F8WFD2 350 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 H3BMH7 237 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 IFNA5P01569 189 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 CXCL1P09341 107 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 ANOS1P23352 680 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 KIAA0895LQ68EN5 471 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 SLC35G3Q8N808 338 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 POM121Q96HA1 1249 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 NUDT16L1Q9BRJ7 211 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 SLC25A31Q9H0C2 315 aa11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 RBM7Q9Y580 266 aaKnown RBP11.22□□□□□ -0.61
TRAPPC9-208ENST00000520857 OR5H1A6NKK0 313 aa11.21□□□□□ -0.61
TRAPPC9-208ENST00000520857 GEMIN2O14893 280 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms