RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 ACTR3P61158 418 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 ERVS71-1P61550 626 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 HERV-K104P61576 105 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 PPP1CBP62140 327 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 MAD2L1BPQ15013 274 aaPredicted RBP5.72□□□□□ -1.49
SDCBP-208ENST00000520228 MOGQ16653 247 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 CCDC92Q53HC0 331 aaPredicted RBP5.72□□□□□ -1.49
SDCBP-208ENST00000520228 SPATA46Q5T0L3 261 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 ACSM5Q6NUN0 579 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 FAHD1Q6P587 224 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 IL17RELQ6ZVW7 336 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 C10orf67Q8IYJ2 551 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 C1orf174Q8IYL3 243 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 ZNF101Q8IZC7 436 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 ZCCHC24Q8N2G6 241 aaKnown RBP5.72□□□□□ -1.49
SDCBP-208ENST00000520228 ZNF525Q8N782 197 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 OR51L1Q8NGJ5 315 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 OR9Q1Q8NGQ5 310 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 CENPNQ96H22 339 aaPredicted RBP5.72□□□□□ -1.49
SDCBP-208ENST00000520228 C4orf45Q96LM5 186 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 PITX2Q99697 317 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 RBM4Q9BWF3 364 aaKnown RBP5.72□□□□□ -1.49
SDCBP-208ENST00000520228 NMNAT2Q9BZQ4 307 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 SHARPINQ9H0F6 387 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 HDHD2Q9H0R4 259 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 ELOVL3Q9HB03 270 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 SLCO1C1Q9NYB5 712 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 TAAR3PQ9P1P4 343 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 MDFICQ9P1T7 246 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 MYEF2Q9P2K5 600 aaKnown RBP5.72□□□□□ -1.49
SDCBP-208ENST00000520228 CYB5R1Q9UHQ9 305 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 ATPIF1Q9UII2 106 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 STUB1Q9UNE7 303 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 LHFPL6Q9Y693 200 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 USF3Q68DE3 2245 aa5.72□□□□□ -1.49
SDCBP-208ENST00000520228 SETD2Q9BYW2 2564 aaPredicted RBP5.71□□□□□ -1.49
SDCBP-208ENST00000520228 IGLV3-9A0A075B6K5 115 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 TVP23AA6NH52 213 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 FAM183AA6NL82 134 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 ZNF593O00488 134 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-208ENST00000520228 GYPBP06028 91 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 CSF3P09919 207 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 CLUP10909 449 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 SPI1P17947 270 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 TUBG1P23258 451 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 RGS6P49758 472 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 BLVRAP53004 296 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 CRISP1P54107 249 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 ESRRGP62508 458 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 HIST1H3AP68431 136 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 CDK5Q00535 292 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 ECH1Q13011 328 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 CARTPTQ16568 116 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 ALKBH6Q3KRA9 238 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 PDLIM3Q53GG5 364 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-208ENST00000520228 HIST2H3PS2Q5TEC6 136 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 TMEM236Q5W0B7 351 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 ZFP1Q6P2D0 407 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 PLBD1Q6P4A8 553 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 DNM1P46Q6ZS02 220 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 RFPL4BQ6ZWI9 263 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 HIST2H3AQ71DI3 136 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 BIVMQ86UB2 503 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 PARP8Q8N3A8 854 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 OR6K6Q8NGW6 343 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 SLC25A40Q8TBP6 338 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 KLF14Q8TD94 323 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-208ENST00000520228 ZNRF4Q8WWF5 429 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 PYDC1Q8WXC3 89 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 SLC7A6Q92536 515 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 PTP4A1Q93096 173 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 PLEKHA8Q96JA3 519 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 FAM71F1Q96KD3 344 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-208ENST00000520228 RAB3IPQ96QF0 476 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-208ENST00000520228 COQ7Q99807 217 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 URM1Q9BTM9 101 aaKnown RBP5.71□□□□□ -1.5
SDCBP-208ENST00000520228 HCAR1Q9BXC0 346 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 REG4Q9BYZ8 158 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 OR2J1Q9GZK6 312 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 OR51V1Q9H2C8 321 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 TPK1Q9H3S4 243 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 MED20Q9H944 212 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 WDR76Q9H967 626 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 MYOZ1Q9NP98 299 aaPredicted RBP5.71□□□□□ -1.5
SDCBP-208ENST00000520228 TUBG2Q9NRH3 451 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 MRPL22Q9NWU5 206 aaKnown RBP5.71□□□□□ -1.5
SDCBP-208ENST00000520228 STARD10Q9Y365 291 aa5.71□□□□□ -1.5
SDCBP-208ENST00000520228 PLCE1Q9P212 2302 aa5.7□□□□□ -1.5
SDCBP-208ENST00000520228 NF1P21359 2839 aa5.7□□□□□ -1.5
SDCBP-208ENST00000520228 IGHV4-30-2A0A087WSY4 118 aa5.7□□□□□ -1.5
SDCBP-208ENST00000520228 LOC390937A0A1W2PQ73 354 aa5.7□□□□□ -1.5
SDCBP-208ENST00000520228 F5H5K5 113 aa5.7□□□□□ -1.5
SDCBP-208ENST00000520228 H3BSA7 217 aa5.7□□□□□ -1.5
SDCBP-208ENST00000520228 NDUFS8O00217 210 aa5.7□□□□□ -1.5
SDCBP-208ENST00000520228 SURF4O15260 269 aa5.7□□□□□ -1.5
SDCBP-208ENST00000520228 IGHV3-13P01766 116 aa5.7□□□□□ -1.5
SDCBP-208ENST00000520228 IRF2P14316 349 aa5.7□□□□□ -1.5
SDCBP-208ENST00000520228 SLC25A16P16260 332 aa5.7□□□□□ -1.5
SDCBP-208ENST00000520228 IGFBP5P24593 272 aa5.7□□□□□ -1.5
SDCBP-208ENST00000520228 MPV17P39210 176 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms