RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 ERGIC1Q969X5 290 aa4.88□□□□□ -1.63
PABPC1-207ENST00000518716 MRGPRFQ96AM1 343 aa4.88□□□□□ -1.63
PABPC1-207ENST00000518716 CCDC124Q96CT7 223 aaKnown RBP4.88□□□□□ -1.63
PABPC1-207ENST00000518716 MCHR1Q99705 422 aa4.88□□□□□ -1.63
PABPC1-207ENST00000518716 B9D2Q9BPU9 175 aa4.88□□□□□ -1.63
PABPC1-207ENST00000518716 ALG12Q9BV10 488 aa4.88□□□□□ -1.63
PABPC1-207ENST00000518716 SPATA5L1Q9BVQ7 753 aa4.88□□□□□ -1.63
PABPC1-207ENST00000518716 MMP28Q9H239 520 aa4.88□□□□□ -1.63
PABPC1-207ENST00000518716 TXNIPQ9H3M7 391 aa4.88□□□□□ -1.63
PABPC1-207ENST00000518716 IKZF5Q9H5V7 419 aa4.88□□□□□ -1.63
PABPC1-207ENST00000518716 TMEM38AQ9H6F2 299 aa4.88□□□□□ -1.63
PABPC1-207ENST00000518716 WDR55Q9H6Y2 383 aaPredicted RBP4.88□□□□□ -1.63
PABPC1-207ENST00000518716 FN3KRPQ9HA64 309 aa4.88□□□□□ -1.63
PABPC1-207ENST00000518716 RNPEPL1Q9HAU8 725 aa4.88□□□□□ -1.63
PABPC1-207ENST00000518716 CACYBPQ9HB71 228 aaKnown RBP4.88□□□□□ -1.63
PABPC1-207ENST00000518716 ABCB10Q9NRK6 738 aa4.88□□□□□ -1.63
PABPC1-207ENST00000518716 SCOCQ9UIL1 159 aa4.88□□□□□ -1.63
PABPC1-207ENST00000518716 RNF24Q9Y225 148 aa4.88□□□□□ -1.63
PABPC1-207ENST00000518716 NUBP2Q9Y5Y2 271 aa4.88□□□□□ -1.63
PABPC1-207ENST00000518716 KPTNQ9Y664 436 aa4.88□□□□□ -1.63
PABPC1-207ENST00000518716 STARD9Q9P2P6 4700 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 IGHV3-64DA0A0J9YX35 117 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 A0A1B0GVG6 124 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 PQLC2LA1A4F0 135 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 TRAPPC13A5PLN9 417 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 GMNCA6NCL1 334 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 LRRC30A6NM36 301 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 ANXA2P2A6NMY6 339 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 IQCF6A8MYZ5 107 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 C5orf58C9J3I9 102 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 BLOC1S5-TXNDC5H3BN57 136 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 K7EQM0 130 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 TOR1AO14656 332 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 HSPA12AO43301 675 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 FAM20BO75063 409 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 ACTL6BO94805 426 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 LHBP01229 141 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 MT-ND1P03886 318 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 HLA-DPB1P04440 258 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 HIST1H2ABP04908 130 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 FBP1P09467 338 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 SPARCP09486 303 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 LINC00614P0C842 121 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 COX4I1P13073 169 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 FUT1P19526 365 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 BGNP21810 368 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 HSD11B1P28845 292 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 CRABP1P29762 137 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 MRPL19P49406 292 aaKnown RBP4.87□□□□□ -1.63
PABPC1-207ENST00000518716 DAP3P51398 398 aaKnown RBP4.87□□□□□ -1.63
PABPC1-207ENST00000518716 POLR2JP52435 117 aaKnown RBP4.87□□□□□ -1.63
PABPC1-207ENST00000518716 CRYBA2P53672 197 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 NCALDP61601 193 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 VSNL1P62760 191 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 FLI1Q01543 452 aaPredicted RBP4.87□□□□□ -1.63
PABPC1-207ENST00000518716 EMX1Q04741 257 aaPredicted RBP4.87□□□□□ -1.63
PABPC1-207ENST00000518716 EGFEM1PQ0D2K5 195 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 HNF4GQ14541 408 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 MPPED2Q15777 294 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 ENTPD8Q5MY95 495 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 AGBL2Q5U5Z8 902 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 LCN1P1Q5VSP4 162 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 ZFP1Q6P2D0 407 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 HIST3H2AQ7L7L0 130 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 VMO1Q7Z5L0 202 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 CYP4Z1Q86W10 505 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 SLC30A8Q8IWU4 369 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 MICU2Q8IYU8 434 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 OFCC1Q8IZS5 231 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 KIRREL3Q8IZU9 778 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 OR5AS1Q8N127 324 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 Q8N2B8 174 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 KLHDC1Q8N7A1 406 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 Q8N7P7 452 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 SLC37A3Q8NCC5 494 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 OR4D10Q8NGI6 311 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 OR9I1Q8NGQ6 314 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 SLC7A6Q92536 515 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 NSMAFQ92636 917 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 HIST1H2ACQ93077 130 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 DUS3LQ96G46 650 aaKnown RBP4.87□□□□□ -1.63
PABPC1-207ENST00000518716 CCDC90BQ9GZT6 254 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 PPA2Q9H2U2 334 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 RIMS4Q9H426 269 aaPredicted RBP4.87□□□□□ -1.63
PABPC1-207ENST00000518716 POLE4Q9NR33 117 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 SERTAD4Q9NUC0 356 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 CCDC59Q9P031 241 aaKnown RBP4.87□□□□□ -1.63
PABPC1-207ENST00000518716 KAAG1Q9UBP8 84 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 ENPP5Q9UJA9 477 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 SLC7A7Q9UM01 511 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 RPH3ALQ9UNE2 315 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 KCNK7Q9Y2U2 307 aa4.87□□□□□ -1.63
PABPC1-207ENST00000518716 SMIM31A0A1B0GVY4 71 aa4.86□□□□□ -1.63
PABPC1-207ENST00000518716 A6NIZ1 184 aa4.86□□□□□ -1.63
PABPC1-207ENST00000518716 SAC3D1A6NKF1 404 aa4.86□□□□□ -1.63
PABPC1-207ENST00000518716 CPSF4LA6NMK7 179 aaKnown RBP4.86□□□□□ -1.63
PABPC1-207ENST00000518716 MCIDASD6RGH6 385 aa4.86□□□□□ -1.63
PABPC1-207ENST00000518716 KPNA4O00629 521 aaPredicted RBP4.86□□□□□ -1.63
PABPC1-207ENST00000518716 NPFFO15130 113 aa4.86□□□□□ -1.63
PABPC1-207ENST00000518716 SGCEO43556 437 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms