RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 CLEC18BQ6UXF7 455 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 LRP11Q86VZ4 500 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 FAM58AQ8N1B3 248 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 RPRMLQ8N4K4 120 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 LINC00337Q8N6G1 96 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 ZFP62Q8NB50 900 aaPredicted RBP2.12□□□□□ -2.07
SQLE-202ENST00000518604 OR52K1Q8NGK4 314 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 OR4C13Q8NGP0 309 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 CMTM2Q8TAZ6 248 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 UBA3Q8TBC4 463 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 PPP1R36Q96LQ0 422 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 OR2V2Q96R30 315 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 OR2A7Q96R45 310 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 CHRNA10Q9GZZ6 450 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 SLC38A1Q9H2H9 487 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 DUSP21Q9H596 190 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 VCX3AQ9NNX9 186 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 C12orf4Q9NQ89 552 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 INSIG2Q9Y5U4 225 aa2.12□□□□□ -2.07
SQLE-202ENST00000518604 LTBP4Q8N2S1 1624 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 SHANK1Q9Y566 2161 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 TRAV8-7A0A075B6U6 113 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 OR2AT4A6NND4 320 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 D6RAR5 112 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 C15orf65H3BRN8 121 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 UPK2O00526 184 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 IGKV1D-16P01601 117 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 CDK1P06493 297 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 PTHLHP12272 177 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 CD9P21926 228 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 DYNC1I2Q13409 638 aaKnown RBP2.11□□□□□ -2.07
SQLE-202ENST00000518604 AMMECR1LQ6DCA0 310 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 PAGE2Q7Z2X7 111 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 CCNYL1Q8N7R7 359 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 OR4A15Q8NGL6 344 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 MAP1LC3CQ9BXW4 147 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 PLA2G12AQ9BZM1 189 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 SHCBP1LQ9BZQ2 653 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 ABCG5Q9H222 651 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 SYT4Q9H2B2 425 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 TMEM38BQ9NVV0 291 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 ANXA10Q9UJ72 324 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 TRAPPC1Q9Y5R8 145 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 BZW2Q9Y6E2 419 aaKnown RBP2.11□□□□□ -2.07
SQLE-202ENST00000518604 ZNF780BQ9Y6R6 833 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 R4GN34 69 aa2.11□□□□□ -2.07
SQLE-202ENST00000518604 TNIKQ9UKE5 1360 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 BAZ1BQ9UIG0 1483 aaKnown RBP2.1□□□□□ -2.07
SQLE-202ENST00000518604 SLC5A10A0PJK1 596 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 K7EPK0 472 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 RFXANKO14593 260 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 RGS5O15539 181 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 LGALS3P17931 250 aaKnown RBP2.1□□□□□ -2.07
SQLE-202ENST00000518604 ENDOGQ14249 297 aaKnown RBP2.1□□□□□ -2.07
SQLE-202ENST00000518604 VAMP3Q15836 100 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 NDUFAF6Q330K2 333 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 ZNF404Q494X3 552 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 LDLRAD2Q5SZI1 272 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 C3orf22Q8N5N4 141 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 ASCC1Q8N9N2 400 aaKnown RBP2.1□□□□□ -2.07
SQLE-202ENST00000518604 OR6K2Q8NGY2 324 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 OR51Q1Q8NH59 317 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 DOK4Q8TEW6 326 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 QKIQ96PU8 341 aaKnown RBP eCLIP2.1□□□□□ -2.07
SQLE-202ENST00000518604 SRRQ9GZT4 340 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 ANKHQ9HCJ1 492 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 SDHAF3Q9NRP4 125 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 ASF1BQ9NVP2 202 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 NLE1Q9NVX2 485 aaPredicted RBP2.1□□□□□ -2.07
SQLE-202ENST00000518604 DDIT4Q9NX09 232 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 ZNF230Q9UIE0 474 aaPredicted RBP2.1□□□□□ -2.07
SQLE-202ENST00000518604 CARHSP1Q9Y2V2 147 aaKnown RBP2.1□□□□□ -2.07
SQLE-202ENST00000518604 SVILO95425 2214 aa2.1□□□□□ -2.07
SQLE-202ENST00000518604 SSH2Q76I76 1423 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 LOC389332A0A1B0GUA5 103 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 H3BQ85 93 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 VAPBO95292 243 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 LIPCP11150 499 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 TAC1P20366 129 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 BGNP21810 368 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 IMPA1P29218 277 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 DSTNP60981 165 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 FMODQ06828 376 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 SSX1Q16384 188 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 ZNF470Q6ECI4 717 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 SLC25A25Q6KCM7 469 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 HCP5Q6MZN7 132 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 PID1Q7Z2X4 250 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 TMEM144Q7Z5S9 345 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 PRNTQ86SH4 94 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 COMTD1Q86VU5 262 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 RBPMSQ93062 196 aaKnown RBP2.09□□□□□ -2.07
SQLE-202ENST00000518604 YPEL4Q96NS1 127 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 NAP1L5Q96NT1 182 aaPredicted RBP2.09□□□□□ -2.07
SQLE-202ENST00000518604 PKMYT1Q99640 499 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 ASB7Q9H672 318 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 SDHAF2Q9NX18 166 aa2.09□□□□□ -2.07
SQLE-202ENST00000518604 NOS1P29475 1434 aa2.08□□□□□ -2.08
SQLE-202ENST00000518604 SPATA31E1Q6ZUB1 1445 aa2.08□□□□□ -2.08
SQLE-202ENST00000518604 CD300LBA8K4G0 201 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms