RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 PIGYQ3MUY2 71 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 NHLRC3Q5JS37 347 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 NKAPLQ5M9Q1 402 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 RSBN1Q5VWQ0 802 aaPredicted RBP6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 C6orf201Q7Z4U5 140 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 RTN4RL2Q86UN3 420 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 LRP11Q86VZ4 500 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 Q8IYB0 196 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 BATF2Q8N1L9 274 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 CELF2-AS1Q8N7Q2 184 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 OR2Z1Q8NG97 314 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 ST8SIA4Q92187 359 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 CNTNAP3BQ96NU0 1288 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 SYT3Q9BQG1 590 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 CACNG6Q9BXT2 260 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 CNTNAP3Q9BZ76 1288 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 MMP28Q9H239 520 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 PLK3Q9H4B4 646 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 ZNF442Q9H7R0 627 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 RHOFQ9HBH0 211 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 CA10Q9NS85 328 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 PLEKHJ1Q9NW61 149 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 MCUBQ9NWR8 336 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 COPZ2Q9P299 210 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 POU2F3Q9UKI9 436 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 HSF4Q9ULV5 492 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 KCNK7Q9Y2U2 307 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 ATP23Q9Y6H3 246 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 HIVEP3Q5T1R4 2406 aa6.5□□□□□ -1.37
SCARNA20.1-201ENST00000516009 CACNA1BQ00975 2339 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 KALRNO60229 2985 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 FUOMA2VDF0 154 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 A6NLC8 198 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 ZNF736B4DX44 427 aaPredicted RBP6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 F5H5P2 479 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 F8VVB4 439 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 F8VWA3 439 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 CDIPTO14735 213 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 TPD52L2O43399 206 aaKnown RBP6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 SSX5O60225 188 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 PFDN1O60925 122 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 PDCD6O75340 191 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 RHBDL1O75783 438 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 OR7C1O76099 320 aaPredicted RBP6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 RAB3DO95716 219 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 CD3DP04234 171 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 CD3EP07766 207 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 ACAA1P09110 424 aaPredicted RBP6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 PRKACAP17612 351 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 GNLYP22749 145 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 GIFP27352 417 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 CHATP28329 748 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 CD200P41217 278 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 CCR6P51684 374 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 SNU13P55769 128 aaKnown RBP6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 MRPS15P82914 257 aaKnown RBP6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 TLE1Q04724 770 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 IKZF1Q13422 519 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 NKPD1Q17RQ9 610 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 PLA1AQ53H76 456 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 NCMAPQ5T1S8 102 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 SFRP4Q6FHJ7 346 aaPredicted RBP6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 SIGIRRQ6IA17 410 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 ADAM5Q6NVV9 412 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 STEAP1BQ6NZ63 245 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 ZNF782Q6ZMW2 699 aaPredicted RBP6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 Q6ZR03 302 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 LINC00596Q86U02 117 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 GLCCI1Q86VQ1 547 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 FAM58AQ8N1B3 248 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 OR4C16Q8NGL9 310 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 LINC01560Q8TB33 94 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 EMG1Q92979 244 aaKnown RBP6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 MRPL24Q96A35 216 aaKnown RBP6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 CREB3L1Q96BA8 519 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 PLPPR2Q96GM1 343 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 ZNF488Q96MN9 340 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 MRPL37Q9BZE1 423 aaKnown RBP6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 TAAR3PQ9P1P4 343 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 NUBP2Q9Y5Y2 271 aa6.49□□□□□ -1.37
SCARNA20.1-201ENST00000516009 ICE1Q9Y2F5 2266 aa6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 TRAV6A0A075B6T7 132 aa6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 IGHV3-64DA0A0J9YX35 117 aa6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 TUBAL3A6NHL2 446 aa6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 ZSCAN5BA6NJL1 495 aa6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 INMT-MINDY4F8WBC2 141 aa6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 NXPH2O95156 264 aa6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 DHFRP00374 187 aa6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 CD74P04233 296 aa6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 TCRBP04435 133 aa6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 OR4A8P0C604 315 aa6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 PGA5P0DJD9 388 aa6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 NAT1P18440 290 aa6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 TBPP20226 339 aa6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 FUT3P21217 361 aa6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 TNFSF4P23510 183 aa6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 HLA-DMAP28067 261 aa6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 GRNP28799 593 aaKnown RBP6.48□□□□□ -1.37
SCARNA20.1-201ENST00000516009 PMELP40967 661 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms