RNA–Protein interactions for RNA: ENST00000515752.5

SDHA-218, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,809 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-218ENST00000515752 GABRA6Q16445 453 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 SRSF7Q16629 238 aaKnown RBP eCLIP13.13□□□□□ -0.31
SDHA-218ENST00000515752 MPV17LQ2QL34 196 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 EIF2S3LQ2VIR3 472 aaKnown RBP13.13□□□□□ -0.31
SDHA-218ENST00000515752 PIGYQ3MUY2 71 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 PLEKHN1Q494U1 663 aaPredicted RBP13.13□□□□□ -0.31
SDHA-218ENST00000515752 ACSF3Q4G176 576 aaPredicted RBP13.13□□□□□ -0.31
SDHA-218ENST00000515752 AADACL3Q5VUY0 350 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 TMEM65Q6PI78 240 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 Q6ZS92 163 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 GCNT2Q8N0V5 402 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 COQ8AQ8NI60 647 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 SNIP1Q8TAD8 396 aaKnown RBP13.13□□□□□ -0.31
SDHA-218ENST00000515752 HPSE2Q8WWQ2 592 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 FN3KRPQ9HA64 309 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 OBP2BQ9NPH6 170 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 C12orf4Q9NQ89 552 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 PLSCR4Q9NRQ2 329 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 DECR2Q9NUI1 292 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 C14orf166Q9Y224 244 aaKnown RBP13.13□□□□□ -0.31
SDHA-218ENST00000515752 FREM2Q5SZK8 3169 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 SFT2D2O95562 160 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 CRHP06850 196 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 FCGR3AP08637 254 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 RPA2P15927 270 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 SELEP16581 610 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 COX5AP20674 150 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 PTGER4P35408 488 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 KIR2DL2P43627 348 aaPredicted RBP13.13□□□□□ -0.31
SDHA-218ENST00000515752 C17orf78Q8N4C9 275 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 CNEP1R1Q8N9A8 125 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 ADAD2Q8NCV1 583 aaKnown RBP13.13□□□□□ -0.31
SDHA-218ENST00000515752 SULT4A1Q9BR01 284 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 PKIBQ9C010 78 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 ZNF286AQ9HBT8 521 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 SPACA1Q9HBV2 294 aa13.13□□□□□ -0.31
SDHA-218ENST00000515752 FREM1Q5H8C1 2179 aa13.12□□□□□ -0.31
SDHA-218ENST00000515752 OR5H14A6NHG9 310 aa13.12□□□□□ -0.31
SDHA-218ENST00000515752 DBX1A6NMT0 343 aa13.12□□□□□ -0.31
SDHA-218ENST00000515752 SDCBPO00560 298 aaPredicted RBP13.12□□□□□ -0.31
SDHA-218ENST00000515752 KLK10O43240 276 aa13.12□□□□□ -0.31
SDHA-218ENST00000515752 OR7C1O76099 320 aaPredicted RBP13.12□□□□□ -0.31
SDHA-218ENST00000515752 CRYABP02511 175 aaKnown RBP13.12□□□□□ -0.31
SDHA-218ENST00000515752 OR5H8P0DN80 308 aa13.12□□□□□ -0.31
SDHA-218ENST00000515752 CBR1P16152 277 aa13.12□□□□□ -0.31
SDHA-218ENST00000515752 SSTR2P30874 369 aa13.12□□□□□ -0.31
SDHA-218ENST00000515752 S100A11P31949 105 aa13.12□□□□□ -0.31
SDHA-218ENST00000515752 DHRS11Q6UWP2 260 aa13.12□□□□□ -0.31
SDHA-218ENST00000515752 OR5M9Q8NGP3 310 aa13.12□□□□□ -0.31
SDHA-218ENST00000515752 CASTOR1Q8WTX7 329 aa13.12□□□□□ -0.31
SDHA-218ENST00000515752 MAB21L2Q9Y586 359 aa13.12□□□□□ -0.31
SDHA-218ENST00000515752 FXYD6-FXYD2A0A087WZ82 144 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 SLC25A4P12235 298 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 RAC2P15153 192 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 CXCL2P19875 107 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 P2RY6Q15077 328 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 Q6ZS49 121 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 RFPL4BQ6ZWI9 263 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 C1orf174Q8IYL3 243 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 C9orf106Q8NAJ2 232 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 TAAR6Q96RI8 345 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 RTBDNQ9BSG5 229 aaPredicted RBP13.11□□□□□ -0.31
SDHA-218ENST00000515752 DPCDQ9BVM2 203 aaPredicted RBP13.11□□□□□ -0.31
SDHA-218ENST00000515752 FXYD6Q9H0Q3 95 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 ZNF442Q9H7R0 627 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 RAB18Q9NP72 206 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 UBQLN2Q9UHD9 624 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 ARPC5O15511 151 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 LYZL6O75951 148 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 GLAP06280 429 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 CTSDP07339 412 aaPredicted RBP13.11□□□□□ -0.31
SDHA-218ENST00000515752 PPP1CBP62140 327 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 SORDQ00796 357 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 IL24Q13007 206 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 GSG1LQ6UXU4 331 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 C3P1Q6ZMU1 363 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 MAFIPQ8WZ33 124 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 GTF3AQ92664 365 aaKnown RBP13.11□□□□□ -0.31
SDHA-218ENST00000515752 MICU1Q9BPX6 476 aa13.11□□□□□ -0.31
SDHA-218ENST00000515752 ZNF2Q9BSG1 426 aaPredicted RBP13.11□□□□□ -0.31
SDHA-218ENST00000515752 RIMS4Q9H426 269 aaPredicted RBP13.11□□□□□ -0.31
SDHA-218ENST00000515752 MYO7BQ6PIF6 2116 aa13.1□□□□□ -0.31
SDHA-218ENST00000515752 A0A0D9SG52 128 aa13.1□□□□□ -0.31
SDHA-218ENST00000515752 MBD3L4A6NDZ8 208 aaPredicted RBP13.1□□□□□ -0.31
SDHA-218ENST00000515752 MBD3L3A6NE82 208 aaPredicted RBP13.1□□□□□ -0.31
SDHA-218ENST00000515752 TUBAL3A6NHL2 446 aa13.1□□□□□ -0.31
SDHA-218ENST00000515752 MBD3L5A6NJ08 208 aaPredicted RBP13.1□□□□□ -0.31
SDHA-218ENST00000515752 SMPD2O60906 423 aa13.1□□□□□ -0.31
SDHA-218ENST00000515752 PGAM2P15259 253 aa13.1□□□□□ -0.31
SDHA-218ENST00000515752 BCL3P20749 454 aa13.1□□□□□ -0.31
SDHA-218ENST00000515752 NPBWR2P48146 333 aa13.1□□□□□ -0.31
SDHA-218ENST00000515752 IDH3GP51553 393 aaPredicted RBP13.1□□□□□ -0.31
SDHA-218ENST00000515752 CLEC18BQ6UXF7 455 aa13.1□□□□□ -0.31
SDHA-218ENST00000515752 KCTD9Q7L273 389 aa13.1□□□□□ -0.31
SDHA-218ENST00000515752 NAXEQ8NCW5 288 aa13.1□□□□□ -0.31
SDHA-218ENST00000515752 MBD3L2Q8NHZ7 208 aaPredicted RBP13.1□□□□□ -0.31
SDHA-218ENST00000515752 SLAMF9Q96A28 289 aa13.1□□□□□ -0.31
SDHA-218ENST00000515752 TMEM230Q96A57 120 aa13.1□□□□□ -0.31
SDHA-218ENST00000515752 VRK1Q99986 396 aaPredicted RBP13.1□□□□□ -0.31
SDHA-218ENST00000515752 HDHD3Q9BSH5 251 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms