RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 LOXL3P58215 753 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 RPL11P62913 178 aaKnown RBP7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 HABP2Q14520 560 aaPredicted RBP7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 GINS1Q14691 196 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 DMRTC1Q5HYR2 192 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 SLC35D3Q5M8T2 416 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 TMEM200BQ69YZ2 307 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 DEGS2Q6QHC5 323 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 LHFPL4Q7Z7J7 247 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 NDUFA11Q86Y39 141 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 ZNF573Q86YE8 665 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 CPOQ8IVL8 374 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 ARHGAP24Q8N264 748 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 POC1AQ8NBT0 407 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 OR4M1Q8NGD0 313 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 RPS4Y2Q8TD47 263 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 FOXRED1Q96CU9 486 aaPredicted RBP7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 LRGUKQ96M69 825 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 CDCA4Q9BXL8 241 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 TEX12Q9BXU0 123 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 ZNF702PQ9H963 129 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 ZNF556Q9HAH1 456 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 GPR84Q9NQS5 396 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 NECAP2Q9NVZ3 263 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 OR14J1Q9UGF5 321 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 TCF19Q9Y242 345 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 KLHDC2Q9Y2U9 406 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 TBL2Q9Y4P3 447 aaKnown RBP7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 NBEAL2Q6ZNJ1 2754 aa7.19□□□□□ -1.26
CDC42SE2-212ENST00000515533 VGLL3A8MV65 326 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 J3QT63 122 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 DHRS3O75911 302 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 NRASP01111 189 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 TK1P04183 234 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 ARG1P05089 322 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 PGA5P0DJD9 388 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 RAP2AP10114 183 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 CD28P10747 220 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 PIPP12273 146 aaPredicted RBP7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 PRDX2P32119 198 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 CEBPDP49716 269 aaPredicted RBP7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 ESRRGP62508 458 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 TRIM25Q14258 630 aaKnown RBP7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 ZNF273Q14593 569 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 CNN3Q15417 329 aaKnown RBP7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 SSX2Q16385 188 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 ZNF829Q3KNS6 432 aaPredicted RBP7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 LCN1P1Q5VSP4 162 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 KRT74Q7RTS7 529 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 TRPM8Q7Z2W7 1104 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 TMEM219Q86XT9 240 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 CALHM1Q8IU99 346 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 CD177Q8N6Q3 437 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 ASCC1Q8N9N2 400 aaKnown RBP7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 SYT8Q8NBV8 401 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 OR13D1Q8NGV5 346 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 OR51E1Q8TCB6 317 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 PIFOQ8TCI5 191 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 ZNF488Q96MN9 340 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 OR5M11Q96RB7 305 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 CITED2Q99967 270 aaPredicted RBP7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 YIPF3Q9GZM5 350 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 PRSS22Q9GZN4 317 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 PBOV1Q9GZY1 135 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 MMP28Q9H239 520 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 SERTAD4Q9NUC0 356 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 FAM206AQ9NX38 181 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 IKZF2Q9UKS7 526 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 GTF2A1LQ9UNN4 478 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 ARL2BPQ9Y2Y0 163 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 TMEM14AQ9Y6G1 99 aa7.18□□□□□ -1.26
CDC42SE2-212ENST00000515533 FAM90A8PA6NJQ4 464 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 H3BUI4 141 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 F2RL2O00254 374 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 SYNGR1O43759 233 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 ZNF254O75437 659 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 E2F6O75461 281 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 ALDOBP05062 364 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 MRPL3P09001 348 aaKnown RBP7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 OSMP13725 252 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 VDAC2P45880 294 aaPredicted RBP7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 RAB13P51153 203 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 RIDAP52758 137 aaKnown RBP7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 HCCSP53701 268 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 EDDM3BP56851 147 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 OR12D2P58182 307 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 DYNC1I2Q13409 638 aaKnown RBP7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 APOFQ13790 326 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 CLVS2Q5SYC1 327 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 ASRGL1Q7L266 308 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 GDPD3Q7L5L3 318 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 ZNF679Q8IYX0 411 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 BATF2Q8N1L9 274 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 Q8N2B8 174 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 C11orf42Q8N5U0 333 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 BBS1Q8NFJ9 593 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 PHF21AQ96BD5 680 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 MALSU1Q96EH3 234 aa7.17□□□□□ -1.26
CDC42SE2-212ENST00000515533 TEAD3Q99594 435 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms