RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 GLS2Q9UI32 602 aa11.15□□□□□ -0.62
TCOF1-215ENST00000515516 SLC16A6O15403 523 aa11.14□□□□□ -0.63
TCOF1-215ENST00000515516 TSPAN9O75954 239 aa11.14□□□□□ -0.63
TCOF1-215ENST00000515516 HTR1AP08908 422 aa11.14□□□□□ -0.63
TCOF1-215ENST00000515516 CCL3L1P16619 93 aa11.14□□□□□ -0.63
TCOF1-215ENST00000515516 PRKACBP22694 351 aa11.14□□□□□ -0.63
TCOF1-215ENST00000515516 MTCP1P56278 107 aa11.14□□□□□ -0.63
TCOF1-215ENST00000515516 SNRPGP62308 76 aaKnown RBP11.14□□□□□ -0.63
TCOF1-215ENST00000515516 OCLNQ16625 522 aa11.14□□□□□ -0.63
TCOF1-215ENST00000515516 LRRC75BQ2VPJ9 315 aa11.14□□□□□ -0.63
TCOF1-215ENST00000515516 SLC25A30Q5SVS4 291 aa11.14□□□□□ -0.63
TCOF1-215ENST00000515516 HCP5Q6MZN7 132 aa11.14□□□□□ -0.63
TCOF1-215ENST00000515516 DTX3Q8N9I9 347 aa11.14□□□□□ -0.63
TCOF1-215ENST00000515516 DNAAF1Q8NEP3 725 aa11.14□□□□□ -0.63
TCOF1-215ENST00000515516 OR13D1Q8NGV5 346 aa11.14□□□□□ -0.63
TCOF1-215ENST00000515516 OR2G2Q8NGZ5 317 aa11.14□□□□□ -0.63
TCOF1-215ENST00000515516 EMG1Q92979 244 aaKnown RBP11.14□□□□□ -0.63
TCOF1-215ENST00000515516 MEGF9Q9H1U4 602 aa11.14□□□□□ -0.63
TCOF1-215ENST00000515516 NEK6Q9HC98 313 aa11.14□□□□□ -0.63
TCOF1-215ENST00000515516 MTCH1Q9NZJ7 389 aa11.14□□□□□ -0.63
TCOF1-215ENST00000515516 GMPPBQ9Y5P6 360 aa11.14□□□□□ -0.63
TCOF1-215ENST00000515516 J3QLW9 94 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 ZNF19P17023 458 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 ATF1P18846 271 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 PEX2P28328 305 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 GABRA5P31644 462 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 KIR3DL2P43630 455 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 POU3F4P49335 361 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 PROK1P58294 105 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 ISL1P61371 349 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 ACTA2P62736 377 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 ACTG2P63267 376 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 ZNF273Q14593 569 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 LY6EQ16553 131 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 AANATQ16613 207 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 ZNF782Q6ZMW2 699 aaPredicted RBP11.13□□□□□ -0.63
TCOF1-215ENST00000515516 LHFPL2Q6ZUX7 228 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 CBR4Q8N4T8 237 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 ACBD7Q8N6N7 88 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 FGGYQ96C11 551 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 SNX22Q96L94 193 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 Q96MT0 163 aa11.13□□□□□ -0.63
TCOF1-215ENST00000515516 IGKV1-27A0A075B6S5 117 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 hADV38S2A0JD32 116 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 MPZL2O60487 215 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 HAND1O96004 215 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 ARG1P05089 322 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 ISG15P05161 165 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 ZNF728P0DKX0 622 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 GABRR1P24046 479 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 CCR9P51686 369 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 BMXP51813 675 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 OR12D2P58182 307 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 MEF2CQ06413 473 aaPredicted RBP11.12□□□□□ -0.63
TCOF1-215ENST00000515516 EDDM3AQ14507 147 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 SLC35E4Q6ICL7 350 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 FDX2Q6P4F2 183 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 UTS2BQ765I0 119 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 OR8H2Q8N162 312 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 ZNF676Q8N7Q3 588 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 OR4C13Q8NGP0 309 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 OR13C3Q8NGS6 347 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 PPP1R35Q8TAP8 253 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 C17orf50Q8WW18 174 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 SPSB1Q96BD6 273 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 ADAT3Q96EY9 351 aaPredicted RBP11.12□□□□□ -0.63
TCOF1-215ENST00000515516 C9orf16Q9BUW7 83 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 MMP27Q9H306 513 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 ABCB10Q9NRK6 738 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 FRRS1LQ9P0K9 344 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 HHLA2Q9UM44 414 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 PCDHGB5Q9Y5G0 923 aa11.12□□□□□ -0.63
TCOF1-215ENST00000515516 C17orf98A8MV24 154 aa11.11□□□□□ -0.63
TCOF1-215ENST00000515516 F8VVB4 439 aa11.11□□□□□ -0.63
TCOF1-215ENST00000515516 F8VWA3 439 aa11.11□□□□□ -0.63
TCOF1-215ENST00000515516 H3BNX3 289 aa11.11□□□□□ -0.63
TCOF1-215ENST00000515516 WIPF1O43516 503 aa11.11□□□□□ -0.63
TCOF1-215ENST00000515516 ZNF737O75373 536 aa11.11□□□□□ -0.63
TCOF1-215ENST00000515516 RBP4P02753 201 aa11.11□□□□□ -0.63
TCOF1-215ENST00000515516 RPSAP08865 295 aaKnown RBP11.11□□□□□ -0.63
TCOF1-215ENST00000515516 PRKACAP17612 351 aa11.11□□□□□ -0.63
TCOF1-215ENST00000515516 AZGP1P25311 298 aaKnown RBP11.11□□□□□ -0.63
TCOF1-215ENST00000515516 KRTAP10-3P60369 221 aa11.11□□□□□ -0.63
TCOF1-215ENST00000515516 DYNC1I2Q13409 638 aaKnown RBP11.11□□□□□ -0.63
TCOF1-215ENST00000515516 GRK1Q15835 563 aa11.11□□□□□ -0.63
TCOF1-215ENST00000515516 LIAT1Q6ZQX7 453 aa11.11□□□□□ -0.63
TCOF1-215ENST00000515516 FAM58AQ8N1B3 248 aa11.11□□□□□ -0.63
TCOF1-215ENST00000515516 C11orf42Q8N5U0 333 aa11.11□□□□□ -0.63
TCOF1-215ENST00000515516 FOXRED1Q96CU9 486 aaPredicted RBP11.11□□□□□ -0.63
TCOF1-215ENST00000515516 C4orf36Q96KX1 117 aa11.11□□□□□ -0.63
TCOF1-215ENST00000515516 ZNF714Q96N38 554 aa11.11□□□□□ -0.63
TCOF1-215ENST00000515516 MBOAT4Q96T53 435 aa11.11□□□□□ -0.63
TCOF1-215ENST00000515516 SEBOXQ9HB31 216 aaPredicted RBP11.11□□□□□ -0.63
TCOF1-215ENST00000515516 FBLN5Q9UBX5 448 aa11.11□□□□□ -0.63
TCOF1-215ENST00000515516 EXOGQ9Y2C4 368 aaKnown RBP11.11□□□□□ -0.63
TCOF1-215ENST00000515516 TBL2Q9Y4P3 447 aaKnown RBP11.11□□□□□ -0.63
TCOF1-215ENST00000515516 MGAM2Q2M2H8 2515 aa11.11□□□□□ -0.63
TCOF1-215ENST00000515516 TRBV2A0A0J9YWF9 115 aa11.1□□□□□ -0.63
TCOF1-215ENST00000515516 H3BUI4 141 aa11.1□□□□□ -0.63
TCOF1-215ENST00000515516 J3QRE1 110 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms