RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 SLC25A28Q96A46 364 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 CHIAQ9BZP6 476 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 PKIBQ9C010 78 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 HES4Q9HCC6 221 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 MRPS18AQ9NVS2 196 aaKnown RBP9.42□□□□□ -0.9
VCAN-212ENST00000515397 RBFOX1Q9NWB1 397 aaKnown RBP9.42□□□□□ -0.9
VCAN-212ENST00000515397 HHLA2Q9UM44 414 aa9.42□□□□□ -0.9
VCAN-212ENST00000515397 SIRT4Q9Y6E7 314 aaPredicted RBP9.42□□□□□ -0.9
VCAN-212ENST00000515397 IGKV1-12A0A0C4DH73 117 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 TRBV2A0A0J9YWF9 115 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 TMEM82A0PJX8 343 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 SLC1A7O00341 560 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 KNG1P01042 644 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 IGKV1D-12P01611 117 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 TK1P04183 234 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 ISG15P05161 165 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 RNASE1P07998 156 aaKnown RBP9.41□□□□□ -0.9
VCAN-212ENST00000515397 OCM2P0CE71 109 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 OCMP0CE72 109 aaPredicted RBP9.41□□□□□ -0.9
VCAN-212ENST00000515397 HKR1P10072 659 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 RBP2P50120 134 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 GBX2P52951 348 aaPredicted RBP9.41□□□□□ -0.9
VCAN-212ENST00000515397 RPL31P62899 125 aaKnown RBP9.41□□□□□ -0.9
VCAN-212ENST00000515397 ZNF273Q14593 569 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 CNN3Q15417 329 aaKnown RBP9.41□□□□□ -0.9
VCAN-212ENST00000515397 HCP5Q6MZN7 132 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 SYS1Q8N2H4 156 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 ZNF561Q8N587 486 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 TPRX1Q8N7U7 411 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 OR5AK2Q8NH90 309 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 PP6455Q8WZ26 134 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 EMG1Q92979 244 aaKnown RBP9.41□□□□□ -0.9
VCAN-212ENST00000515397 ORAI1Q96D31 301 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 CHST6Q9GZX3 395 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 FGF20Q9NP95 211 aaPredicted RBP9.41□□□□□ -0.9
VCAN-212ENST00000515397 FAM96BQ9Y3D0 163 aa9.41□□□□□ -0.9
VCAN-212ENST00000515397 MEIOCA2RUB1 952 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 NPFFO15130 113 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 XPNPEP2O43895 674 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 LALBAP00709 142 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 PRKACAP17612 351 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 PRKACBP22694 351 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 COX7A1P24310 79 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 COMPP49747 757 aaPredicted RBP9.4□□□□□ -0.9
VCAN-212ENST00000515397 EDDM3BP56851 147 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 SCN1BQ07699 218 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 PDZK1IP1Q13113 114 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 EDDM3AQ14507 147 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 C11orf91Q3C1V1 193 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 OGFRL1Q5TC84 451 aaPredicted RBP9.4□□□□□ -0.9
VCAN-212ENST00000515397 TTC23Q5W5X9 447 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 LAIR2Q6ISS4 152 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 CRIP3Q6Q6R5 217 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 ZNF782Q6ZMW2 699 aaPredicted RBP9.4□□□□□ -0.9
VCAN-212ENST00000515397 UTS2BQ765I0 119 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 C11orf42Q8N5U0 333 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 ZFP41Q8N8Y5 198 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 CCDC54Q8NEL0 328 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 OR52N4Q8NGI2 321 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 OR51A2Q8NGJ7 313 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 OR13C5Q8NGS8 318 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 TSEN15Q8WW01 171 aaKnown RBP9.4□□□□□ -0.9
VCAN-212ENST00000515397 RGP1Q92546 391 aaPredicted RBP9.4□□□□□ -0.9
VCAN-212ENST00000515397 GGHQ92820 318 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 C10orf35Q96D05 121 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 MRPL48Q96GC5 212 aaKnown RBP9.4□□□□□ -0.9
VCAN-212ENST00000515397 RDH12Q96NR8 316 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 OPALINQ96PE5 141 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 PRDM13Q9H4Q3 707 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 ZCCHC4Q9H5U6 513 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 NEK6Q9HC98 313 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 INPP5EQ9NRR6 644 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 ING3Q9NXR8 418 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 GSTK1Q9Y2Q3 226 aa9.4□□□□□ -0.9
VCAN-212ENST00000515397 PNMA8CA0A1B0GUJ8 204 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 ERICH4A6NGS2 130 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 CLDN34H7C241 214 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 K7N7A8 449 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 M0R1W7 72 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 SIRPB1O00241 398 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 ZNF737O75373 536 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 HAND1O96004 215 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 CHRM2P08172 466 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 HCKP08631 526 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 RPSAP08865 295 aaKnown RBP9.39□□□□□ -0.91
VCAN-212ENST00000515397 MDKP21741 143 aaPredicted RBP9.39□□□□□ -0.91
VCAN-212ENST00000515397 GABRR1P24046 479 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 EEF1B2P24534 225 aaKnown RBP9.39□□□□□ -0.91
VCAN-212ENST00000515397 SAA4P35542 130 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 BPIFB3P59826 476 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 RELBQ01201 579 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 SRSF4Q08170 494 aaKnown RBP9.39□□□□□ -0.91
VCAN-212ENST00000515397 IL18R1Q13478 541 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 BLMHQ13867 455 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 ASPHD2Q6ICH7 369 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 C17orf107Q6ZR85 190 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 SATL1Q86VE3 508 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 FAM58AQ8N1B3 248 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 KIR3DL3Q8N743 410 aa9.39□□□□□ -0.91
VCAN-212ENST00000515397 DNAAF1Q8NEP3 725 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms