RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 MRPS24Q96EL2 167 aaKnown RBP17.6■□□□□ 0.41
LSM6-207ENST00000515311 PIMREGQ9BSJ6 248 aa17.6■□□□□ 0.41
LSM6-207ENST00000515311 MRI1Q9BV20 369 aa17.6■□□□□ 0.41
LSM6-207ENST00000515311 CST11Q9H112 138 aa17.6■□□□□ 0.41
LSM6-207ENST00000515311 HMG20AQ9NP66 347 aa17.6■□□□□ 0.41
LSM6-207ENST00000515311 FBLN5Q9UBX5 448 aa17.6■□□□□ 0.41
LSM6-207ENST00000515311 DAPK2Q9UIK4 370 aa17.6■□□□□ 0.41
LSM6-207ENST00000515311 WIPI2Q9Y4P8 454 aa17.6■□□□□ 0.41
LSM6-207ENST00000515311 A6NHS1 94 aa17.59■□□□□ 0.41
LSM6-207ENST00000515311 KNG1P01042 644 aa17.59■□□□□ 0.41
LSM6-207ENST00000515311 CSTBP04080 98 aaKnown RBP17.59■□□□□ 0.41
LSM6-207ENST00000515311 SLC2A2P11168 524 aaPredicted RBP17.59■□□□□ 0.41
LSM6-207ENST00000515311 FGF12P61328 243 aa17.59■□□□□ 0.41
LSM6-207ENST00000515311 HOXA4Q00056 320 aaPredicted RBP17.59■□□□□ 0.41
LSM6-207ENST00000515311 P2RY14Q15391 338 aa17.59■□□□□ 0.41
LSM6-207ENST00000515311 KCNJ8Q15842 424 aa17.59■□□□□ 0.41
LSM6-207ENST00000515311 MICBQ29980 383 aa17.59■□□□□ 0.41
LSM6-207ENST00000515311 SHEQ5VZ18 495 aa17.59■□□□□ 0.41
LSM6-207ENST00000515311 FIP1L1Q6UN15 594 aaKnown RBP17.59■□□□□ 0.41
LSM6-207ENST00000515311 OR2W3Q7Z3T1 314 aa17.59■□□□□ 0.41
LSM6-207ENST00000515311 EMG1Q92979 244 aaKnown RBP17.59■□□□□ 0.41
LSM6-207ENST00000515311 FAM3DQ96BQ1 224 aa17.59■□□□□ 0.41
LSM6-207ENST00000515311 LIN7BQ9HAP6 207 aa17.59■□□□□ 0.41
LSM6-207ENST00000515311 DNAJB11Q9UBS4 358 aa17.59■□□□□ 0.41
LSM6-207ENST00000515311 NOTCH2Q04721 2471 aa17.58■□□□□ 0.41
LSM6-207ENST00000515311 VWC2LB2RUY7 222 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 C3orf80F5H4A9 247 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 HTR3BO95264 441 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 GTF2F2P13984 249 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 SERPINA2P20848 420 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 RORCP51449 518 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 CLDN12P56749 244 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 SCAND1P57086 179 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 GMFBP60983 142 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 QRFPP83859 136 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 ZNF404Q494X3 552 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 NHLRC3Q5JS37 347 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 SPIN3Q5JUX0 258 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 FOXB2Q5VYV0 432 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 LRRC28Q86X40 367 aaPredicted RBP17.58■□□□□ 0.4
LSM6-207ENST00000515311 KRTAP1-3Q8IUG1 177 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 BATF2Q8N1L9 274 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 MUC20Q8N307 709 aaPredicted RBP17.58■□□□□ 0.4
LSM6-207ENST00000515311 OR51T1Q8NGJ9 327 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 OR10K1Q8NGX5 313 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 KCNG3Q8TAE7 436 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 DYNC2LI1Q8TCX1 351 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 BARHL1Q9BZE3 327 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 NLKQ9UBE8 527 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 CCDC168Q8NDH2 2452 aa17.58■□□□□ 0.4
LSM6-207ENST00000515311 OR2AT4A6NND4 320 aa17.57■□□□□ 0.4
LSM6-207ENST00000515311 ZNF205O95201 554 aa17.57■□□□□ 0.4
LSM6-207ENST00000515311 VSIG8P0DPA2 414 aa17.57■□□□□ 0.4
LSM6-207ENST00000515311 CALCBP10092 127 aa17.57■□□□□ 0.4
LSM6-207ENST00000515311 PRKACAP17612 351 aa17.57■□□□□ 0.4
LSM6-207ENST00000515311 TMEM155Q4W5P6 130 aa17.57■□□□□ 0.4
LSM6-207ENST00000515311 AVPI1Q5T686 147 aa17.57■□□□□ 0.4
LSM6-207ENST00000515311 IDNKQ5T6J7 187 aa17.57■□□□□ 0.4
LSM6-207ENST00000515311 STUMQ69YW2 141 aa17.57■□□□□ 0.4
LSM6-207ENST00000515311 SFRP4Q6FHJ7 346 aaPredicted RBP17.57■□□□□ 0.4
LSM6-207ENST00000515311 OSR2Q8N2R0 312 aa17.57■□□□□ 0.4
LSM6-207ENST00000515311 OR51D1Q8NGF3 324 aa17.57■□□□□ 0.4
LSM6-207ENST00000515311 KCTD12Q96CX2 325 aaKnown RBP17.57■□□□□ 0.4
LSM6-207ENST00000515311 SEH1LQ96EE3 360 aa17.57■□□□□ 0.4
LSM6-207ENST00000515311 BPESC1Q9GZL8 116 aa17.57■□□□□ 0.4
LSM6-207ENST00000515311 SEBOXQ9HB31 216 aaPredicted RBP17.57■□□□□ 0.4
LSM6-207ENST00000515311 TMEM165Q9HC07 324 aa17.57■□□□□ 0.4
LSM6-207ENST00000515311 CCDC59Q9P031 241 aaKnown RBP17.57■□□□□ 0.4
LSM6-207ENST00000515311 PRRC2AP48634 2157 aaKnown RBP17.57■□□□□ 0.4
LSM6-207ENST00000515311 MAP1AP78559 2803 aaPredicted RBP17.56■□□□□ 0.4
LSM6-207ENST00000515311 IGHV3OR15-7A0A075B7D8 119 aa17.56■□□□□ 0.4
LSM6-207ENST00000515311 IGHV4-30-2A0A087WSY4 118 aa17.56■□□□□ 0.4
LSM6-207ENST00000515311 TMEM14DPA8MWL7 114 aa17.56■□□□□ 0.4
LSM6-207ENST00000515311 LDLRAD4O15165 306 aa17.56■□□□□ 0.4
LSM6-207ENST00000515311 NDUFA2O43678 99 aa17.56■□□□□ 0.4
LSM6-207ENST00000515311 CRTAPO75718 401 aaPredicted RBP17.56■□□□□ 0.4
LSM6-207ENST00000515311 SLC25A16P16260 332 aa17.56■□□□□ 0.4
LSM6-207ENST00000515311 SOX6P35712 828 aa17.56■□□□□ 0.4
LSM6-207ENST00000515311 NR4A2P43354 598 aa17.56■□□□□ 0.4
LSM6-207ENST00000515311 ZNF146Q15072 292 aa17.56■□□□□ 0.4
LSM6-207ENST00000515311 C2orf76Q3KRA6 126 aa17.56■□□□□ 0.4
LSM6-207ENST00000515311 TMEM104Q8NE00 496 aa17.56■□□□□ 0.4
LSM6-207ENST00000515311 C19orf18Q8NEA5 215 aa17.56■□□□□ 0.4
LSM6-207ENST00000515311 DEFB108BQ8NET1 73 aa17.56■□□□□ 0.4
LSM6-207ENST00000515311 ANGPTL6Q8NI99 470 aa17.56■□□□□ 0.4
LSM6-207ENST00000515311 POM121Q96HA1 1249 aa17.56■□□□□ 0.4
LSM6-207ENST00000515311 DNTTIP1Q9H147 329 aa17.56■□□□□ 0.4
LSM6-207ENST00000515311 ABRACLQ9P1F3 81 aa17.56■□□□□ 0.4
LSM6-207ENST00000515311 ETV7Q9Y603 341 aa17.56■□□□□ 0.4
LSM6-207ENST00000515311 A0A1W2PP11 408 aa17.55■□□□□ 0.4
LSM6-207ENST00000515311 ISPDA4D126 451 aa17.55■□□□□ 0.4
LSM6-207ENST00000515311 PSG2P11465 335 aa17.55■□□□□ 0.4
LSM6-207ENST00000515311 MGMTP16455 207 aa17.55■□□□□ 0.4
LSM6-207ENST00000515311 ART1P52961 327 aa17.55■□□□□ 0.4
LSM6-207ENST00000515311 RBM11P57052 281 aaKnown RBP17.55■□□□□ 0.4
LSM6-207ENST00000515311 DYNC1I2Q13409 638 aaKnown RBP17.55■□□□□ 0.4
LSM6-207ENST00000515311 UNC119Q13432 240 aa17.55■□□□□ 0.4
LSM6-207ENST00000515311 IL13RA2Q14627 380 aa17.55■□□□□ 0.4
LSM6-207ENST00000515311 DCDC5Q6ZRR9 648 aa17.55■□□□□ 0.4
LSM6-207ENST00000515311 LINC00596Q86U02 117 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms