RNA–Protein interactions for RNA: ENST00000514901.5

NUP54-216, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-216ENST00000514901 RFPL4AA6NLU0 287 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 RFPL4AL1F8VTS6 287 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 DVL1O14640 695 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 SIGLEC5O15389 551 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 CRLF1O75462 422 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 KDM4BO94953 1096 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 TMEM225BP0DP42 221 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 AMY2BP19961 511 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 PRDX2P32119 198 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 ZNF93P35789 620 aaPredicted RBP11.86□□□□□ -0.51
NUP54-216ENST00000514901 ZP1P60852 638 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 CHRFAM7AQ494W8 412 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 FAM120AOSQ5T036 256 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 DDI2Q5TDH0 399 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 PHC2Q8IXK0 858 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 FAM58AQ8N1B3 248 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 ZNF561Q8N587 486 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 PNLDC1Q8NA58 520 aaKnown RBP11.86□□□□□ -0.51
NUP54-216ENST00000514901 OR52N4Q8NGI2 321 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 OR51A2Q8NGJ7 313 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 RFT1Q96AA3 541 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 DMRTB1Q96MA1 342 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 GAFA1Q96PS6 74 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 SPACA5Q96QH8 159 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 BEX2Q9BXY8 128 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 SMURF1Q9HCE7 757 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 NOX4Q9NPH5 578 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 GLS2Q9UI32 602 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 ZNF222Q9UK12 451 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 INSIG2Q9Y5U4 225 aa11.86□□□□□ -0.51
NUP54-216ENST00000514901 KIR2DS1A0A191URI9 304 aa11.85□□□□□ -0.51
NUP54-216ENST00000514901 A0A1W2PPK0 400 aa11.85□□□□□ -0.51
NUP54-216ENST00000514901 SPRY1O43609 319 aaPredicted RBP11.85□□□□□ -0.51
NUP54-216ENST00000514901 ENSAO43768 121 aaKnown RBP11.85□□□□□ -0.51
NUP54-216ENST00000514901 CHRM2P08172 466 aa11.85□□□□□ -0.51
NUP54-216ENST00000514901 BCL3P20749 454 aa11.85□□□□□ -0.51
NUP54-216ENST00000514901 GABRA5P31644 462 aa11.85□□□□□ -0.51
NUP54-216ENST00000514901 PAX2Q02962 417 aa11.85□□□□□ -0.51
NUP54-216ENST00000514901 ARMCX4Q5H9R4 360 aa11.85□□□□□ -0.51
NUP54-216ENST00000514901 UBE2UQ5VVX9 321 aa11.85□□□□□ -0.51
NUP54-216ENST00000514901 CRIP3Q6Q6R5 217 aa11.85□□□□□ -0.51
NUP54-216ENST00000514901 CEACAM19Q7Z692 300 aa11.85□□□□□ -0.51
NUP54-216ENST00000514901 FAM216BQ8N7L0 139 aa11.85□□□□□ -0.51
NUP54-216ENST00000514901 EMG1Q92979 244 aaKnown RBP11.85□□□□□ -0.51
NUP54-216ENST00000514901 C7orf69Q9H7B7 122 aa11.85□□□□□ -0.51
NUP54-216ENST00000514901 TCF7L1Q9HCS4 588 aa11.85□□□□□ -0.51
NUP54-216ENST00000514901 MMP26Q9NRE1 261 aa11.85□□□□□ -0.51
NUP54-216ENST00000514901 PCDHB16Q9NRJ7 776 aa11.85□□□□□ -0.51
NUP54-216ENST00000514901 SLC25A10Q9UBX3 287 aaPredicted RBP11.85□□□□□ -0.51
NUP54-216ENST00000514901 JMJD1CQ15652 2540 aa11.85□□□□□ -0.51
NUP54-216ENST00000514901 TRAV8-7A0A075B6U6 113 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 IGHV2-70DA0A0C4DH43 119 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 F8VVB4 439 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 F8VWA3 439 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 PIN1P1O15428 100 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 ANGPTL7O43827 346 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 SC5DO75845 299 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 INMTO95050 263 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 TNFAIP8O95379 198 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 PTGFRP43088 359 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 NPBWR2P48146 333 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 MTNR1BP49286 362 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 CAV3P56539 151 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 PAX8Q06710 450 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 IKZF1Q13422 519 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 ZNF146Q15072 292 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 DGUOKQ16854 277 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 SPIN3Q5JUX0 258 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 ELP2Q6IA86 826 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 ASCL4Q6XD76 172 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 BTN2A1Q7KYR7 527 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 CD177Q8N6Q3 437 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 NKAIN3Q8N8D7 197 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 OR5D18Q8NGL1 313 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 TNFAIP8L1Q8WVP5 186 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 ST8SIA4Q92187 359 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 TMEM203Q969S6 136 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 ORAI1Q96D31 301 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 S100A13Q99584 98 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 NUDT16L1Q9BRJ7 211 aaKnown RBP11.84□□□□□ -0.51
NUP54-216ENST00000514901 MRI1Q9BV20 369 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 FAM234AQ9H0X4 552 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 SLITRK2Q9H156 845 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 HMG20AQ9NP66 347 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 RBFOX1Q9NWB1 397 aaKnown RBP11.84□□□□□ -0.51
NUP54-216ENST00000514901 SF3B6Q9Y3B4 125 aaKnown RBP11.84□□□□□ -0.51
NUP54-216ENST00000514901 MAB21L2Q9Y586 359 aa11.84□□□□□ -0.51
NUP54-216ENST00000514901 IGKV1-12A0A0C4DH73 117 aa11.83□□□□□ -0.52
NUP54-216ENST00000514901 GABRPO00591 440 aa11.83□□□□□ -0.52
NUP54-216ENST00000514901 SH2D1BO14796 132 aa11.83□□□□□ -0.52
NUP54-216ENST00000514901 ZNF780AO75290 641 aaPredicted RBP11.83□□□□□ -0.52
NUP54-216ENST00000514901 ARL6IP5O75915 188 aa11.83□□□□□ -0.52
NUP54-216ENST00000514901 RGS9O75916 674 aaPredicted RBP11.83□□□□□ -0.52
NUP54-216ENST00000514901 IGKV1D-12P01611 117 aa11.83□□□□□ -0.52
NUP54-216ENST00000514901 MAS1P04201 325 aa11.83□□□□□ -0.52
NUP54-216ENST00000514901 UCHL1P09936 223 aa11.83□□□□□ -0.52
NUP54-216ENST00000514901 PPIAL4GP0DN37 164 aa11.83□□□□□ -0.52
NUP54-216ENST00000514901 SRMP19623 302 aa11.83□□□□□ -0.52
NUP54-216ENST00000514901 RPS25P62851 125 aaKnown RBP11.83□□□□□ -0.52
NUP54-216ENST00000514901 RSU1Q15404 277 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms