RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 HSMCR30P0CW71 290 aa11.57□□□□□ -0.56
USP46-209ENST00000514536 CALCBP10092 127 aa11.57□□□□□ -0.56
USP46-209ENST00000514536 ADRA2CP18825 462 aa11.57□□□□□ -0.56
USP46-209ENST00000514536 PRDX2P32119 198 aa11.57□□□□□ -0.56
USP46-209ENST00000514536 NPBWR2P48146 333 aa11.57□□□□□ -0.56
USP46-209ENST00000514536 CEBPDP49716 269 aaPredicted RBP11.57□□□□□ -0.56
USP46-209ENST00000514536 PAX8Q06710 450 aa11.57□□□□□ -0.56
USP46-209ENST00000514536 KISS1Q15726 138 aa11.57□□□□□ -0.56
USP46-209ENST00000514536 DGUOKQ16854 277 aa11.57□□□□□ -0.56
USP46-209ENST00000514536 LRRC10Q5BKY1 277 aa11.57□□□□□ -0.56
USP46-209ENST00000514536 CD177Q8N6Q3 437 aa11.57□□□□□ -0.56
USP46-209ENST00000514536 ZNRF1Q8ND25 227 aa11.57□□□□□ -0.56
USP46-209ENST00000514536 DACT3Q96B18 629 aaPredicted RBP11.57□□□□□ -0.56
USP46-209ENST00000514536 OR14A2Q96R54 314 aa11.57□□□□□ -0.56
USP46-209ENST00000514536 MRI1Q9BV20 369 aa11.57□□□□□ -0.56
USP46-209ENST00000514536 MAB21L2Q9Y586 359 aa11.57□□□□□ -0.56
USP46-209ENST00000514536 AUP1Q9Y679 476 aa11.57□□□□□ -0.56
USP46-209ENST00000514536 JMJD1CQ15652 2540 aa11.56□□□□□ -0.56
USP46-209ENST00000514536 IGKV1-12A0A0C4DH73 117 aa11.56□□□□□ -0.56
USP46-209ENST00000514536 ZNF879B4DU55 563 aa11.56□□□□□ -0.56
USP46-209ENST00000514536 ENSAO43768 121 aaKnown RBP11.56□□□□□ -0.56
USP46-209ENST00000514536 IGKV1D-12P01611 117 aa11.56□□□□□ -0.56
USP46-209ENST00000514536 TMEM225BP0DP42 221 aa11.56□□□□□ -0.56
USP46-209ENST00000514536 BCL3P20749 454 aa11.56□□□□□ -0.56
USP46-209ENST00000514536 PPP3R1P63098 170 aa11.56□□□□□ -0.56
USP46-209ENST00000514536 OR52N4Q8NGI2 321 aa11.56□□□□□ -0.56
USP46-209ENST00000514536 SDSLQ96GA7 329 aa11.56□□□□□ -0.56
USP46-209ENST00000514536 RBFOX1Q9NWB1 397 aaKnown RBP11.56□□□□□ -0.56
USP46-209ENST00000514536 SLC25A10Q9UBX3 287 aaPredicted RBP11.56□□□□□ -0.56
USP46-209ENST00000514536 METRNQ9UJH8 293 aa11.56□□□□□ -0.56
USP46-209ENST00000514536 TRBV5-7A0A0A0MS05 114 aa11.55□□□□□ -0.56
USP46-209ENST00000514536 ECDO95905 644 aaPredicted RBP11.55□□□□□ -0.56
USP46-209ENST00000514536 KNG1P01042 644 aa11.55□□□□□ -0.56
USP46-209ENST00000514536 NDUFB7P17568 137 aa11.55□□□□□ -0.56
USP46-209ENST00000514536 IGFBP3P17936 291 aaPredicted RBP11.55□□□□□ -0.56
USP46-209ENST00000514536 TGFBR2P37173 567 aa11.55□□□□□ -0.56
USP46-209ENST00000514536 Q8IYB0 196 aa11.55□□□□□ -0.56
USP46-209ENST00000514536 TMEM185AQ8NFB2 350 aa11.55□□□□□ -0.56
USP46-209ENST00000514536 NANPQ8TBE9 248 aa11.55□□□□□ -0.56
USP46-209ENST00000514536 H1FXQ92522 213 aaKnown RBP11.55□□□□□ -0.56
USP46-209ENST00000514536 EMG1Q92979 244 aaKnown RBP11.55□□□□□ -0.56
USP46-209ENST00000514536 GPER1Q99527 375 aa11.55□□□□□ -0.56
USP46-209ENST00000514536 NKX3-1Q99801 234 aaPredicted RBP11.55□□□□□ -0.56
USP46-209ENST00000514536 TMED9Q9BVK6 235 aa11.55□□□□□ -0.56
USP46-209ENST00000514536 YTHDF1Q9BYJ9 559 aaKnown RBP11.55□□□□□ -0.56
USP46-209ENST00000514536 TMEM138Q9NPI0 162 aa11.55□□□□□ -0.56
USP46-209ENST00000514536 WNK2Q9Y3S1 2297 aa11.55□□□□□ -0.56
USP46-209ENST00000514536 ANK3Q12955 4377 aaKnown RBP11.55□□□□□ -0.56
USP46-209ENST00000514536 TRAV8-7A0A075B6U6 113 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 GPR37O15354 613 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 PIN1P1O15428 100 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 GPX5O75715 221 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 ALDOBP05062 364 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 BDKRB2P30411 391 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 CAPZA1P52907 286 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 ZP1P60852 638 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 GPR50Q13585 617 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 INSL4Q14641 139 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 C11orf91Q3C1V1 193 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 LIPKQ5VXJ0 399 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 C1QL2Q7Z5L3 287 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 FAM58AQ8N1B3 248 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 MS4A15Q8N5U1 240 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 TEX29Q8N6K0 151 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 PNLDC1Q8NA58 520 aaKnown RBP11.54□□□□□ -0.56
USP46-209ENST00000514536 UFD1Q92890 307 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 DERL3Q96Q80 235 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 ELL3Q9HB65 397 aaPredicted RBP11.54□□□□□ -0.56
USP46-209ENST00000514536 ISYNA1Q9NPH2 558 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 NOX4Q9NPH5 578 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 IL36RNQ9UBH0 155 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 CKLFQ9UBR5 152 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 RPUSD1Q9UJJ7 312 aaKnown RBP11.54□□□□□ -0.56
USP46-209ENST00000514536 GABRPO00591 440 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 KDM4BO94953 1096 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 LIPFP07098 398 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 SFTPBP07988 381 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 PRKACAP17612 351 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 DUSP1P28562 367 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 SNU13P55769 128 aaKnown RBP11.54□□□□□ -0.56
USP46-209ENST00000514536 CAV3P56539 151 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 GABARAPL2P60520 117 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 FGF12P61328 243 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 TPBGQ13641 420 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 ACSM3Q53FZ2 586 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 DDI2Q5TDH0 399 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 UNQ9370/PRO34162Q6UXP9 181 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 SAXO1Q8IYX7 474 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 ZNF561Q8N587 486 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 ZSCAN4Q8NAM6 433 aaPredicted RBP11.54□□□□□ -0.56
USP46-209ENST00000514536 CPNE2Q96FN4 548 aaPredicted RBP11.54□□□□□ -0.56
USP46-209ENST00000514536 MGLLQ99685 303 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 MDFIQ99750 246 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 DCTN5Q9BTE1 182 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 CNTD2Q9H8S5 307 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 FOXJ3Q9UPW0 622 aa11.54□□□□□ -0.56
USP46-209ENST00000514536 MRPS14O60783 128 aaKnown RBP11.53□□□□□ -0.56
USP46-209ENST00000514536 IFNA2P01563 188 aa11.53□□□□□ -0.56
USP46-209ENST00000514536 CHRM2P08172 466 aa11.53□□□□□ -0.56
USP46-209ENST00000514536 PPIAL4GP0DN37 164 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms