RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 FLRT3Q9NZU0 649 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 CKAP5Q14008 2032 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 ZNF816-ZNF321PA0A0X1KG74 233 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 OR2W5A6NFC9 320 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 ZNF814B7Z6K7 855 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 ADRA2AP08913 450 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 TAS2R60P59551 318 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 UNQ9370/PRO34162Q6UXP9 181 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 UBE3DQ7Z6J8 389 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 RFLNBQ8N5W9 214 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 ZNF321PQ8N8H1 164 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 TSPAN32Q96QS1 320 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 PSENENQ9NZ42 101 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 SPAG17Q6Q759 2223 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 CXorf65A6NEN9 183 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 H3BP45 60 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 TRGC2P03986 189 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 CTSDP07339 412 aaPredicted RBP10□□□□□ -0.81
TCOF1-211ENST00000513346 RNF224P0DH78 156 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 COL9A1P20849 921 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 PNLIPRP2P54317 469 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 CCL7P80098 99 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 TEX30Q5JUR7 227 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 OR4C3Q8NH37 302 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 NRTNQ99748 197 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 KCNIP2Q9NS61 270 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 MED29Q9NX70 200 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 TRAPPC2LQ9UL33 140 aa10□□□□□ -0.81
TCOF1-211ENST00000513346 A0A0G2JK05 382 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 TUSC2O75896 110 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 OR10J1P30954 320 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 LPAR6P43657 344 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 BSXQ3C1V8 233 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 GCNT2Q8N0V5 402 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 OR2T10Q8NGZ9 312 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 OR51F2Q8NH61 342 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 REG4Q9BYZ8 158 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 VN1R1Q9GZP7 353 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 OR5AC2Q9NZP5 309 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 KCNE5Q9UJ90 142 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 LHX6Q9UPM6 363 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 PIN1P1O15428 100 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 VAMP5O95183 116 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 HNF1AP20823 631 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 THBS3P49746 956 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 ZNF121P58317 390 aaPredicted RBP9.99□□□□□ -0.81
TCOF1-211ENST00000513346 ERVS71-1P61550 626 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 ZXDAP98168 799 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 TLE1Q04724 770 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 OR8G1Q15617 311 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 ZIC1Q15915 447 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 ZMIZ1Q9ULJ6 1067 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 ZFHX2Q9C0A1 2572 aaPredicted RBP9.99□□□□□ -0.81
TCOF1-211ENST00000513346 EPOPA6NHQ4 379 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 MOSPD3O75425 235 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 IAPPP10997 89 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 FABP6P51161 128 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 FZD2Q14332 565 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 MICBQ29980 383 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 ADAMTS17Q8TE56 1095 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 LIPHQ8WWY8 451 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 APH1AQ96BI3 265 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 PRSS27Q9BQR3 290 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 KLK13Q9UKR3 277 aa9.99□□□□□ -0.81
TCOF1-211ENST00000513346 A0A1W2PNV4 684 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 CDC14BO60729 498 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 OR5AC1P0C628 307 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 FOXC1Q12948 553 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 OR5I1Q13606 314 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 MAML2Q8IZL2 1156 aaPredicted RBP9.98□□□□□ -0.81
TCOF1-211ENST00000513346 OR10J5Q8NHC4 309 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 RAB24Q969Q5 203 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 SLC35D1Q9NTN3 355 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 NAT8Q9UHE5 227 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 SLCO1B1Q9Y6L6 691 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 IGHV3-9P01782 118 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 TMEM255AQ5JRV8 349 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 ASB5Q8WWX0 329 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 C11orf40Q8WZ69 217 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 PTX4Q96A99 478 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 LRRC3BQ96PB8 259 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 AQP10Q96PS8 301 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 C12orf49Q9H741 205 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 DUSP13Q9UII6 198 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 KLF13Q9Y2Y9 288 aaPredicted RBP9.98□□□□□ -0.81
TCOF1-211ENST00000513346 EFSO43281 561 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 OR2J2O76002 312 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 GCGP01275 180 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 FCARP24071 287 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 GABRA2P47869 451 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 ZNF124Q15973 351 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 PRSS53Q2L4Q9 553 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 TCTEX1D1Q8N7M0 179 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 AUP1Q9Y679 476 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 MAP1LC3B2A6NCE7 125 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 C4orf47A7E2U8 309 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 TIMM8AO60220 97 aaPredicted RBP9.98□□□□□ -0.81
TCOF1-211ENST00000513346 ACTL6AO96019 429 aa9.98□□□□□ -0.81
TCOF1-211ENST00000513346 MBPP02686 304 aaPredicted RBP9.98□□□□□ -0.81
TCOF1-211ENST00000513346 CD74P04233 296 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms