RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 CRTAPO75718 401 aaPredicted RBP10.53□□□□□ -0.72
PDPN-210ENST00000513143 NXPH2O95156 264 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 GTF2F2P13984 249 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 MGMTP16455 207 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 RAB6AP20340 208 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 DNASE1P24855 282 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 PTH2RP49190 550 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 HOXA4Q00056 320 aaPredicted RBP10.53□□□□□ -0.72
PDPN-210ENST00000513143 PLA2G7Q13093 441 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 NHLRC3Q5JS37 347 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 ACP7Q6ZNF0 438 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 FAM58AQ8N1B3 248 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 BATF2Q8N1L9 274 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 OSR2Q8N2R0 312 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 OR51T1Q8NGJ9 327 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 MCFD2Q8NI22 146 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 EMG1Q92979 244 aaKnown RBP10.53□□□□□ -0.72
PDPN-210ENST00000513143 NINJ1Q92982 152 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 MRPS24Q96EL2 167 aaKnown RBP10.53□□□□□ -0.72
PDPN-210ENST00000513143 WDR13Q9H1Z4 485 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 BANF2Q9H503 90 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 BARX1Q9HBU1 254 aaPredicted RBP10.53□□□□□ -0.72
PDPN-210ENST00000513143 HMG20AQ9NP66 347 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 MYOZ1Q9NP98 299 aaPredicted RBP10.53□□□□□ -0.72
PDPN-210ENST00000513143 BEX4Q9NWD9 120 aaPredicted RBP10.53□□□□□ -0.72
PDPN-210ENST00000513143 COMMD3Q9UBI1 195 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 RAB22AQ9UL26 194 aa10.53□□□□□ -0.72
PDPN-210ENST00000513143 ANKRD17O75179 2603 aaKnown RBP10.53□□□□□ -0.72
PDPN-210ENST00000513143 NBPF19A0A087WUL8 3843 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 FSTL3O95633 263 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 MPIG6BO95866 241 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 PRKACAP17612 351 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 ATP5J2P56134 94 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 GMFBP60983 142 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 RPS27AP62979 156 aaKnown RBP10.52□□□□□ -0.73
PDPN-210ENST00000513143 ZNF146Q15072 292 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 SMIM21Q3B7S5 101 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 FAM201AQ5SY85 155 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 TEX36Q5VZQ5 186 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 FAM90A1Q86YD7 464 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 BOLLQ8N9W6 283 aaKnown RBP10.52□□□□□ -0.73
PDPN-210ENST00000513143 FAM46BQ96A09 425 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 MBD6Q96DN6 1003 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 POM121Q96HA1 1249 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 LURAP1Q96LR2 239 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 Q96M66 194 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 CMTM3Q96MX0 182 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 TM2D1Q9BX74 207 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 TMEM59Q9BXS4 323 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 MMP27Q9H306 513 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 CHODLQ9H9P2 273 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 PTTG2Q9NZH5 202 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 POLQO75417 2590 aa10.52□□□□□ -0.73
PDPN-210ENST00000513143 PPIAL4EA0A075B759 164 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 CLDN25C9JDP6 229 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 PPIAL4DF5H284 164 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 CTDSP2O14595 271 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 KNG1P01042 644 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 PPIAL4FP0DN26 164 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 MUC1P15941 1255 aaPredicted RBP10.51□□□□□ -0.73
PDPN-210ENST00000513143 CD80P33681 288 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 EFNB2P52799 333 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 ART1P52961 327 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 RBM11P57052 281 aaKnown RBP10.51□□□□□ -0.73
PDPN-210ENST00000513143 TMEM33P57088 247 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 IL13RA2Q14627 380 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 DEFB113Q30KQ7 82 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 PIGYQ3MUY2 71 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 FIP1L1Q6UN15 594 aaKnown RBP10.51□□□□□ -0.73
PDPN-210ENST00000513143 FAM89BQ8N5H3 189 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 SAMD12Q8N8I0 201 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 SLC25A38Q96DW6 304 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 SEH1LQ96EE3 360 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 SELENOIQ9C0D9 397 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 C6orf62Q9GZU0 229 aaPredicted RBP10.51□□□□□ -0.73
PDPN-210ENST00000513143 LPAR5Q9H1C0 372 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 ABCG5Q9H222 651 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 SEBOXQ9HB31 216 aaPredicted RBP10.51□□□□□ -0.73
PDPN-210ENST00000513143 RHBDL2Q9NX52 303 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 NLKQ9UBE8 527 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 IL36RNQ9UBH0 155 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 ST3GAL6Q9Y274 331 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 PPIAL4AQ9Y536 164 aa10.51□□□□□ -0.73
PDPN-210ENST00000513143 IGHV3OR15-7A0A075B7D8 119 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 TRAV38-1A0A0B4J264 116 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 FAM90A10PA6NDY2 464 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 FAM90A18PA6NE21 464 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 FAM90A16PA6NEW6 464 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 OOEPA6NGQ2 149 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 FAM90A20PA6NIJ5 464 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 FAM90A8PA6NJQ4 464 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 FAM90A7PA6NKC0 464 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 OR2AT4A6NND4 320 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 FAM90A22PA8MWA6 464 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 FAM90A12PA8MX19 464 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 FAM90A5PA8MXJ8 464 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 FAM90A23PA8MXZ1 464 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 LGALS8O00214 317 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 SSX4O60224 188 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 HPGDSO60760 199 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms