RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 NPIPB7O75200 414 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 PTBP1P26599 531 aaKnown RBP eCLIP8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 UBE2NLQ5JXB2 153 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 AADACL3Q5VUY0 350 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 SLC38A6Q8IZM9 456 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 MFSD4AQ8N468 514 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 FOXN4Q96NZ1 517 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 CIB3Q96Q77 187 aaPredicted RBP8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 C1QTNF5Q9BXJ0 243 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 DCSTAMPQ9H295 470 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 ZNF275Q9NSD4 429 aaPredicted RBP8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 MGAT4CQ9UBM8 478 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 CYB5R1Q9UHQ9 305 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 EXOGQ9Y2C4 368 aaKnown RBP8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 ARHGEF17Q96PE2 2063 aaPredicted RBP8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 IGHV1-18A0A0C4DH31 117 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 FAM240BA0A1B0GVZ2 78 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 NCBP2LA6PVI3 153 aaKnown RBP8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 HIST1H1BP16401 226 aaKnown RBP8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 CDKN2AP42771 156 aaKnown RBP8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 LTBQ06643 244 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 PPP1R8Q12972 351 aaKnown RBP8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 SAMD13Q5VXD3 122 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 PLET1Q6UQ28 207 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 APOOLQ6UXV4 268 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 OR8H3Q8N146 312 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 C12orf45Q8N5I9 185 aaPredicted RBP8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 TERB2Q8NHR7 220 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 OR2S2Q9NQN1 319 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 PSORS1C1Q9UIG5 152 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 A0A0G2JLM5 398 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 C13orf42A0A1B0GVH6 325 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 FCER2P06734 321 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 EPHA2P29317 976 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 CDKN1AP38936 164 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 UQCRFS1P47985 274 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 FOXL2P58012 376 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 OR4C12Q96R67 309 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 TTTY10Q9BZA0 68 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 AICDAQ9GZX7 198 aa8.32□□□□□ -1.08
POLR2J3-215ENST00000511313 SDCBPO00560 298 aaPredicted RBP8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 SHOXO15266 292 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 SLC2A1P11166 492 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 COX7A1P24310 79 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 MS4A2Q01362 244 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 CDONQ4KMG0 1287 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 HINT2Q9BX68 163 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 TRAV18A0A075B6X5 111 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 ZNF736B4DX44 427 aaPredicted RBP8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 ORC5O43913 435 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 ALX3O95076 343 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 RPL15P61313 204 aaKnown RBP8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 RPL23AP62750 156 aaKnown RBP8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 ADORA2A-AS1P86434 159 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 IL24Q13007 206 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 RNLSQ5VYX0 342 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 TMEM236Q5W0B7 351 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 OR2T10Q8NGZ9 312 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 PRR14Q9BWN1 585 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 COMMD3Q9UBI1 195 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 SESN1Q9Y6P5 492 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 A0A1W2PN81 502 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 CTAG2O75638 210 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 IFNA5P01569 189 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 CHRNA7P36544 502 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 LAMTOR1Q6IAA8 161 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 ZNF474Q6S9Z5 364 aaPredicted RBP8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 OR52I1Q8NGK6 324 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 FAM3DQ96BQ1 224 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 SEBOXQ9HB31 216 aaPredicted RBP8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 TREM2Q9NZC2 230 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 FAM215AQ9Y5M1 114 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 AKR7A2O43488 359 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 CD55P08174 381 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 T-ENOLP0DO92 83 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 CRHBPP24387 322 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 DNM1P46Q6ZS02 220 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 TMEM86BQ8N661 226 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 FLYWCH2Q96CP2 140 aaKnown RBP8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 ZG16BQ96DA0 208 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 CDCA4Q9BXL8 241 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 METTL17Q9H7H0 456 aaPredicted RBP8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 FZR1Q9UM11 496 aa8.31□□□□□ -1.08
POLR2J3-215ENST00000511313 ZNF318Q5VUA4 2279 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 TRAV1-2A0A0B4J238 106 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 OR2AT4A6NND4 320 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 C3orf80F5H4A9 247 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 ARG1P05089 322 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 AKAIN1P0CW23 69 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 LOXL1Q08397 574 aaPredicted RBP8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 KIR3DL3Q8N743 410 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 SAMD12Q8N8I0 201 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 SCGB1C1Q8TD33 95 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 ISOC1Q96CN7 298 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 DPM3Q9P2X0 92 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 RP1P56715 2156 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 A0A1W2PQL4 384 aaPredicted RBP8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 TCRBV5S2A0A599 114 aa8.3□□□□□ -1.08
POLR2J3-215ENST00000511313 AVPI1Q5T686 147 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms