RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 RUSC1-AS1Q66K80 236 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 IZUMO2Q6UXV1 221 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 BRD3OSQ6XYD6 125 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 LHFPL2Q6ZUX7 228 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 PHC2Q8IXK0 858 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 PDZD9Q8IXQ8 264 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 ZNF485Q8NCK3 441 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 LY6G5BQ8NDX9 201 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 RPS4Y2Q8TD47 263 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 HAVCR2Q8TDQ0 301 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 SPSB1Q96BD6 273 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 SDSLQ96GA7 329 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 DCTN5Q9BTE1 182 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 SIRPDQ9H106 197 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 VCX3BQ9H321 246 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 NEK6Q9HC98 313 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 RBFOX1Q9NWB1 397 aaKnown RBP11.53□□□□□ -0.56
DDX41-212ENST00000511040 FKBP14Q9NWM8 211 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 TAS2R4Q9NYW5 299 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 IL36RNQ9UBH0 155 aa11.53□□□□□ -0.56
DDX41-212ENST00000511040 MDFIC2A0A1B0GVS7 189 aa11.52□□□□□ -0.57
DDX41-212ENST00000511040 A0A1W2PQ09 198 aa11.52□□□□□ -0.57
DDX41-212ENST00000511040 KNG1P01042 644 aa11.52□□□□□ -0.57
DDX41-212ENST00000511040 DUSP1P28562 367 aa11.52□□□□□ -0.57
DDX41-212ENST00000511040 PDZK1IP1Q13113 114 aa11.52□□□□□ -0.57
DDX41-212ENST00000511040 ASPHD2Q6ICH7 369 aa11.52□□□□□ -0.57
DDX41-212ENST00000511040 SERPINA12Q8IW75 414 aa11.52□□□□□ -0.57
DDX41-212ENST00000511040 MKXQ8IYA7 352 aa11.52□□□□□ -0.57
DDX41-212ENST00000511040 FAM185AQ8N0U4 392 aa11.52□□□□□ -0.57
DDX41-212ENST00000511040 PARP16Q8N5Y8 322 aa11.52□□□□□ -0.57
DDX41-212ENST00000511040 OR51A2Q8NGJ7 313 aa11.52□□□□□ -0.57
DDX41-212ENST00000511040 GPR148Q8TDV2 347 aa11.52□□□□□ -0.57
DDX41-212ENST00000511040 GHSRQ92847 366 aa11.52□□□□□ -0.57
DDX41-212ENST00000511040 EMG1Q92979 244 aaKnown RBP11.52□□□□□ -0.57
DDX41-212ENST00000511040 LHX4Q969G2 390 aa11.52□□□□□ -0.57
DDX41-212ENST00000511040 ORAI1Q96D31 301 aa11.52□□□□□ -0.57
DDX41-212ENST00000511040 SMIM19Q96E16 107 aa11.52□□□□□ -0.57
DDX41-212ENST00000511040 ZNF48Q96MX3 618 aaPredicted RBP11.52□□□□□ -0.57
DDX41-212ENST00000511040 NKX3-1Q99801 234 aaPredicted RBP11.52□□□□□ -0.57
DDX41-212ENST00000511040 C19orf24Q9BVV8 132 aa11.52□□□□□ -0.57
DDX41-212ENST00000511040 SUCNR1Q9BXA5 334 aa11.52□□□□□ -0.57
DDX41-212ENST00000511040 IGKV1-12A0A0C4DH73 117 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 SLC1A7O00341 560 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 MYL12BO14950 172 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 GPR37O15354 613 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 SULT1B1O43704 296 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 CYB5AP00167 134 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 IGKV1D-12P01611 117 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 MT-ND2P03891 347 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 CDK1P06493 297 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 MYF6P23409 242 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 CAV3P56539 151 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 COL10A1Q03692 680 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 C11orf91Q3C1V1 193 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 GPR157Q5UAW9 335 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 DMKNQ6E0U4 476 aaPredicted RBP11.51□□□□□ -0.57
DDX41-212ENST00000511040 CRIP3Q6Q6R5 217 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 VMO1Q7Z5L0 202 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 SATL1Q86VE3 508 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 ZNF561Q8N587 486 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 OR4M1Q8NGD0 313 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 OR5D14Q8NGL3 314 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 DUX5Q96PT3 197 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 ESM1Q9NQ30 184 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 SIRT7Q9NRC8 400 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 C19orf12Q9NSK7 152 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 PAK1IP1Q9NWT1 392 aaPredicted RBP11.51□□□□□ -0.57
DDX41-212ENST00000511040 ZNF281Q9Y2X9 895 aa11.51□□□□□ -0.57
DDX41-212ENST00000511040 CENPVL3A0A0U1RRI6 287 aa11.5□□□□□ -0.57
DDX41-212ENST00000511040 TMEM225BP0DP42 221 aa11.5□□□□□ -0.57
DDX41-212ENST00000511040 PRKACAP17612 351 aa11.5□□□□□ -0.57
DDX41-212ENST00000511040 RAB3AP20336 220 aa11.5□□□□□ -0.57
DDX41-212ENST00000511040 HILS1P60008 231 aa11.5□□□□□ -0.57
DDX41-212ENST00000511040 RIPK1Q13546 671 aa11.5□□□□□ -0.57
DDX41-212ENST00000511040 RBMS3Q6XE24 437 aaKnown RBP11.5□□□□□ -0.57
DDX41-212ENST00000511040 FAM58AQ8N1B3 248 aa11.5□□□□□ -0.57
DDX41-212ENST00000511040 NANOGP1Q8N7R0 232 aa11.5□□□□□ -0.57
DDX41-212ENST00000511040 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.5□□□□□ -0.57
DDX41-212ENST00000511040 ASCC1Q8N9N2 400 aaKnown RBP11.5□□□□□ -0.57
DDX41-212ENST00000511040 C8orf46Q8TAG6 207 aa11.5□□□□□ -0.57
DDX41-212ENST00000511040 TMEM106AQ96A25 262 aa11.5□□□□□ -0.57
DDX41-212ENST00000511040 ANKRD60Q9BZ19 345 aa11.5□□□□□ -0.57
DDX41-212ENST00000511040 SCN3BQ9NY72 215 aa11.5□□□□□ -0.57
DDX41-212ENST00000511040 ERGIC3Q9Y282 383 aa11.5□□□□□ -0.57
DDX41-212ENST00000511040 PCDHGB5Q9Y5G0 923 aa11.5□□□□□ -0.57
DDX41-212ENST00000511040 KPTNQ9Y664 436 aa11.5□□□□□ -0.57
DDX41-212ENST00000511040 A0A0A6YYJ9 748 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 A0A1W2PPK0 400 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 A0A1W2PRD5 423 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 A0A1W2PRF3 423 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 A0A1W2PRM7 423 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 MEX3AA1L020 520 aaKnown RBP11.49□□□□□ -0.57
DDX41-212ENST00000511040 HAND1O96004 215 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 TK1P04183 234 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 CD2P06729 351 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 WNT4P56705 351 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 RPS11P62280 158 aaKnown RBP eCLIP11.49□□□□□ -0.57
DDX41-212ENST00000511040 KLRD1Q13241 179 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 PDCD1Q15116 288 aa11.49□□□□□ -0.57
DDX41-212ENST00000511040 KISS1Q15726 138 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms