RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 SLC39A7Q92504 469 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 PIGCQ92535 297 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 MRPL24Q96A35 216 aaKnown RBP15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 ZNF581Q9P0T4 197 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 IGKV1-12A0A0C4DH73 117 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 ZNF816-ZNF321PA0A0X1KG74 233 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 XRCC2O43543 280 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 CYTIPO60759 359 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 IGKV1D-12P01611 117 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 SERPINA7P05543 415 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 PUSL1Q8N0Z8 303 aaKnown RBP15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 SMIM8Q96KF7 97 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 PRRX2Q99811 253 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 HRH4Q9H3N8 390 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 LIME1Q9H400 295 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 NAA60Q9H7X0 242 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 ZNF286AQ9HBT8 521 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 PURGQ9UJV8 347 aaKnown RBP15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 LSM5Q9Y4Y9 91 aaKnown RBP15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 LRP3O75074 770 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 ADCYAP1P18509 176 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 FXYD4P59646 89 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 MALLQ13021 153 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 PABPC1L2AQ5JQF8 200 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 SLC23A3Q6PIS1 610 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 SLC22A25Q6T423 547 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 OR4A4PQ8NGN8 299 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 FGFBP3Q8TAT2 258 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 RTN4IP1Q8WWV3 396 aaPredicted RBP15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 DEPPQ9NTK1 212 aa15.55■□□□□ 0.08
CCHCR1-228ENST00000509552 JTBO76095 146 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 SCGB1D2O95969 90 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 FCGR2CP31995 323 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 CLDN15P56746 228 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 OR8B8Q15620 311 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 MST1LQ2TV78 715 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 OR2A2Q6IF42 318 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 BRICD5Q6PL45 260 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 ABHD3Q8WU67 409 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 CT55Q8WUE5 264 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 DYRK2Q92630 601 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 GALNT14Q96FL9 552 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 CARHSP1Q9Y2V2 147 aaKnown RBP15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 LOXL2Q9Y4K0 774 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 PDCD6O75340 191 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 MED6O75586 246 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 SRSF3P84103 164 aaKnown RBP15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 GUCA2BQ16661 112 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 C10orf91Q5T1B1 145 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 SYT3Q9BQG1 590 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 SUCNR1Q9BXA5 334 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 PLEKHA2Q9HB19 425 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 UQCC1Q9NVA1 299 aa15.54■□□□□ 0.08
CCHCR1-228ENST00000509552 FAM221AA4D161 298 aa15.53■□□□□ 0.08
CCHCR1-228ENST00000509552 GAPDHP04406 335 aaKnown RBP15.53■□□□□ 0.08
CCHCR1-228ENST00000509552 OR5AC1P0C628 307 aa15.53■□□□□ 0.08
CCHCR1-228ENST00000509552 GLP1RP43220 463 aa15.53■□□□□ 0.08
CCHCR1-228ENST00000509552 SPEM2Q0P670 501 aa15.53■□□□□ 0.08
CCHCR1-228ENST00000509552 TMEM187Q14656 261 aa15.53■□□□□ 0.08
CCHCR1-228ENST00000509552 SPAG16Q8N0X2 631 aa15.53■□□□□ 0.08
CCHCR1-228ENST00000509552 ZNF845Q96IR2 970 aaPredicted RBP15.53■□□□□ 0.08
CCHCR1-228ENST00000509552 RHOFQ9HBH0 211 aa15.53■□□□□ 0.08
CCHCR1-228ENST00000509552 P4HTMQ9NXG6 502 aa15.53■□□□□ 0.08
CCHCR1-228ENST00000509552 FBXL17Q9UF56 701 aa15.53■□□□□ 0.08
CCHCR1-228ENST00000509552 BOKQ9UMX3 212 aaPredicted RBP15.53■□□□□ 0.08
CCHCR1-228ENST00000509552 RCC1P18754 421 aaPredicted RBP15.52■□□□□ 0.08
CCHCR1-228ENST00000509552 ACP1P24666 158 aa15.52■□□□□ 0.08
CCHCR1-228ENST00000509552 SULT1A2P50226 295 aa15.52■□□□□ 0.08
CCHCR1-228ENST00000509552 GFRA1P56159 465 aa15.52■□□□□ 0.08
CCHCR1-228ENST00000509552 SP6Q3SY56 376 aa15.52■□□□□ 0.08
CCHCR1-228ENST00000509552 TMEM45BQ96B21 275 aa15.52■□□□□ 0.08
CCHCR1-228ENST00000509552 SEC11CQ9BY50 192 aa15.52■□□□□ 0.08
CCHCR1-228ENST00000509552 PRDM14Q9GZV8 571 aa15.52■□□□□ 0.08
CCHCR1-228ENST00000509552 TMEM231Q9H6L2 316 aa15.52■□□□□ 0.08
CCHCR1-228ENST00000509552 PARPBPQ9NWS1 579 aa15.52■□□□□ 0.08
CCHCR1-228ENST00000509552 NOSIPQ9Y314 301 aaKnown RBP15.52■□□□□ 0.08
CCHCR1-228ENST00000509552 NCKAP5O14513 1909 aa15.52■□□□□ 0.08
CCHCR1-228ENST00000509552 LINC01387J3KSC0 135 aa15.52■□□□□ 0.07
CCHCR1-228ENST00000509552 MRPL33O75394 65 aaKnown RBP15.52■□□□□ 0.07
CCHCR1-228ENST00000509552 SNAPINO95295 136 aa15.52■□□□□ 0.07
CCHCR1-228ENST00000509552 MMP7P09237 267 aaPredicted RBP15.52■□□□□ 0.07
CCHCR1-228ENST00000509552 CAV2P51636 162 aa15.52■□□□□ 0.07
CCHCR1-228ENST00000509552 RBM11P57052 281 aaKnown RBP15.52■□□□□ 0.07
CCHCR1-228ENST00000509552 TMEM33P57088 247 aa15.52■□□□□ 0.07
CCHCR1-228ENST00000509552 NRN1LQ496H8 165 aa15.52■□□□□ 0.07
CCHCR1-228ENST00000509552 HAGHLQ6PII5 290 aaPredicted RBP15.52■□□□□ 0.07
CCHCR1-228ENST00000509552 MARS2Q96GW9 593 aaKnown RBP15.52■□□□□ 0.07
CCHCR1-228ENST00000509552 C1QTNF5Q9BXJ0 243 aa15.52■□□□□ 0.07
CCHCR1-228ENST00000509552 ZNF442Q9H7R0 627 aa15.52■□□□□ 0.07
CCHCR1-228ENST00000509552 ZFP57Q9NU63 452 aa15.52■□□□□ 0.07
CCHCR1-228ENST00000509552 PINLYPA6NC86 204 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 C19orf67A6NJJ6 358 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 E5RGE8 158 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 ZNF205O95201 554 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 F10P00742 488 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 EDN3P14138 238 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 FUT3P21217 361 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 NME2P22392 152 aa15.51■□□□□ 0.07
CCHCR1-228ENST00000509552 PHLDA2Q53GA4 152 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms