RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 SMIM19Q96E16 107 aa13.99□□□□□ -0.17
CLDND1-219ENST00000508659 SIRPDQ9H106 197 aa13.99□□□□□ -0.17
CLDND1-219ENST00000508659 ELL3Q9HB65 397 aaPredicted RBP13.99□□□□□ -0.17
CLDND1-219ENST00000508659 BABAM2Q9NXR7 383 aa13.99□□□□□ -0.17
CLDND1-219ENST00000508659 MTCH1Q9NZJ7 389 aa13.99□□□□□ -0.17
CLDND1-219ENST00000508659 CLEC2DQ9UHP7 191 aa13.99□□□□□ -0.17
CLDND1-219ENST00000508659 TRIM77I1YAP6 450 aa13.98□□□□□ -0.17
CLDND1-219ENST00000508659 MT-ND2P03891 347 aa13.98□□□□□ -0.17
CLDND1-219ENST00000508659 SOX2P48431 317 aa13.98□□□□□ -0.17
CLDND1-219ENST00000508659 LAIR2Q6ISS4 152 aa13.98□□□□□ -0.17
CLDND1-219ENST00000508659 C9orf139Q6ZV77 190 aa13.98□□□□□ -0.17
CLDND1-219ENST00000508659 VMO1Q7Z5L0 202 aa13.98□□□□□ -0.17
CLDND1-219ENST00000508659 FAM185AQ8N0U4 392 aa13.98□□□□□ -0.17
CLDND1-219ENST00000508659 BCL6BQ8N143 479 aaPredicted RBP13.98□□□□□ -0.17
CLDND1-219ENST00000508659 PARP16Q8N5Y8 322 aa13.98□□□□□ -0.17
CLDND1-219ENST00000508659 CD177Q8N6Q3 437 aa13.98□□□□□ -0.17
CLDND1-219ENST00000508659 ASCC1Q8N9N2 400 aaKnown RBP13.98□□□□□ -0.17
CLDND1-219ENST00000508659 SPATA3Q8NHX4 192 aa13.98□□□□□ -0.17
CLDND1-219ENST00000508659 GATAD2BQ8WXI9 593 aa13.98□□□□□ -0.17
CLDND1-219ENST00000508659 RFT1Q96AA3 541 aa13.98□□□□□ -0.17
CLDND1-219ENST00000508659 CPNE2Q96FN4 548 aaPredicted RBP13.98□□□□□ -0.17
CLDND1-219ENST00000508659 DMRTB1Q96MA1 342 aa13.98□□□□□ -0.17
CLDND1-219ENST00000508659 PLCXD1Q9NUJ7 323 aa13.98□□□□□ -0.17
CLDND1-219ENST00000508659 PSORS1C1Q9UIG5 152 aa13.98□□□□□ -0.17
CLDND1-219ENST00000508659 SPRY1O43609 319 aaPredicted RBP13.97□□□□□ -0.17
CLDND1-219ENST00000508659 TAS2R43P59537 309 aa13.97□□□□□ -0.17
CLDND1-219ENST00000508659 BPIFB3P59826 476 aa13.97□□□□□ -0.17
CLDND1-219ENST00000508659 OR5D18Q8NGL1 313 aa13.97□□□□□ -0.17
CLDND1-219ENST00000508659 RPS4Y2Q8TD47 263 aa13.97□□□□□ -0.17
CLDND1-219ENST00000508659 RGP1Q92546 391 aaPredicted RBP13.97□□□□□ -0.17
CLDND1-219ENST00000508659 LHX4Q969G2 390 aa13.97□□□□□ -0.17
CLDND1-219ENST00000508659 SPACA5Q96QH8 159 aa13.97□□□□□ -0.17
CLDND1-219ENST00000508659 RBFOX1Q9NWB1 397 aaKnown RBP13.97□□□□□ -0.17
CLDND1-219ENST00000508659 F8VVB4 439 aa13.96□□□□□ -0.17
CLDND1-219ENST00000508659 F8VWA3 439 aa13.96□□□□□ -0.17
CLDND1-219ENST00000508659 MAGEB3O15480 346 aa13.96□□□□□ -0.17
CLDND1-219ENST00000508659 RAB3AP20336 220 aa13.96□□□□□ -0.17
CLDND1-219ENST00000508659 BCL3P20749 454 aa13.96□□□□□ -0.17
CLDND1-219ENST00000508659 ACTG1P63261 375 aa13.96□□□□□ -0.17
CLDND1-219ENST00000508659 PDZK1IP1Q13113 114 aa13.96□□□□□ -0.17
CLDND1-219ENST00000508659 BLMHQ13867 455 aa13.96□□□□□ -0.17
CLDND1-219ENST00000508659 RUSC1-AS1Q66K80 236 aa13.96□□□□□ -0.17
CLDND1-219ENST00000508659 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.96□□□□□ -0.17
CLDND1-219ENST00000508659 TMEM106AQ96A25 262 aa13.96□□□□□ -0.17
CLDND1-219ENST00000508659 FAM234AQ9H0X4 552 aa13.96□□□□□ -0.17
CLDND1-219ENST00000508659 ESM1Q9NQ30 184 aa13.96□□□□□ -0.17
CLDND1-219ENST00000508659 SIRT7Q9NRC8 400 aa13.96□□□□□ -0.17
CLDND1-219ENST00000508659 TAS2R4Q9NYW5 299 aa13.96□□□□□ -0.17
CLDND1-219ENST00000508659 ZNF281Q9Y2X9 895 aa13.96□□□□□ -0.17
CLDND1-219ENST00000508659 CENPVL3A0A0U1RRI6 287 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 A0A1W2PPH5 198 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 DNAJC9-AS1A6NH13 148 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 M0R1W7 72 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 ANGPTL7O43827 346 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 ALX3O95076 343 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 LALBAP00709 142 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 TK1P04183 234 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 PRKACAP17612 351 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 C21orf33P30042 268 aaPredicted RBP13.95□□□□□ -0.18
CLDND1-219ENST00000508659 WNT4P56705 351 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 RPL31P62899 125 aaKnown RBP13.95□□□□□ -0.18
CLDND1-219ENST00000508659 PPP3R1P63098 170 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 COL10A1Q03692 680 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 BAMBIQ13145 260 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 SPIN3Q5JUX0 258 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 IZUMO2Q6UXV1 221 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 PDZD9Q8IXQ8 264 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 FAM58AQ8N1B3 248 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 ZFP41Q8N8Y5 198 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 ZNF48Q96MX3 618 aaPredicted RBP13.95□□□□□ -0.18
CLDND1-219ENST00000508659 ZMAT3Q9HA38 289 aaKnown RBP13.95□□□□□ -0.18
CLDND1-219ENST00000508659 C19orf12Q9NSK7 152 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 FKBP14Q9NWM8 211 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 IL36RNQ9UBH0 155 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 ERGIC3Q9Y282 383 aa13.95□□□□□ -0.18
CLDND1-219ENST00000508659 SIRT4Q9Y6E7 314 aaPredicted RBP13.95□□□□□ -0.18
CLDND1-219ENST00000508659 COL6A5A8TX70 2615 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 IGHV1-69DA0A0B4J2H0 117 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 MDFIC2A0A1B0GVS7 189 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 OGG1O15527 345 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 HAND1O96004 215 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 IGHV1-69P01742 117 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 CHRM2P08172 466 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 NPBWR2P48146 333 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 HSPA13P48723 471 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 SNU13P55769 128 aaKnown RBP13.94□□□□□ -0.18
CLDND1-219ENST00000508659 UBA52P62987 128 aaKnown RBP13.94□□□□□ -0.18
CLDND1-219ENST00000508659 GUCA2AQ02747 115 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 KISS1Q15726 138 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 TUSC1Q2TAM9 212 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 YIF1BQ5BJH7 314 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 DMKNQ6E0U4 476 aaPredicted RBP13.94□□□□□ -0.18
CLDND1-219ENST00000508659 ZDHHC22Q8N966 263 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 ZNF485Q8NCK3 441 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 FAM216AQ8WUB2 273 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 GHSRQ92847 366 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 GPER1Q99527 375 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 ANKRD60Q9BZ19 345 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 FAM192AQ9GZU8 254 aa13.94□□□□□ -0.18
CLDND1-219ENST00000508659 METTL8Q9H825 291 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms