RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 MAPK1IP1LQ8NDC0 245 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 OR5D13Q8NGL4 314 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 OR13D1Q8NGV5 346 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 KTI12Q96EK9 354 aaPredicted RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 TMEM56Q96MV1 263 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 WFIKKN1Q96NZ8 548 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 TSNAXQ99598 290 aaKnown RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 DDX31Q9H8H2 851 aaKnown RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 ACOT13Q9NPJ3 140 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 DLL4Q9NR61 685 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 PCDH15Q96QU1 1955 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 A0A0D9SG52 128 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 B9A039 149 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 SIRPB1O00241 398 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 AQP8O94778 261 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 TOX4O94842 621 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 RBP4P02753 201 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 CD14P08571 375 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 BSGP35613 385 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 PRDX4Q13162 271 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 MEF2DQ14814 521 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 OPCMLQ14982 345 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 CEACAM16Q2WEN9 425 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 XKR7Q5GH72 579 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 SLC37A3Q8NCC5 494 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 GPR119Q8TDV5 335 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 SLCO4A1Q96BD0 722 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 GALMQ96C23 342 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 TIMP4Q99727 224 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 PRRT1Q99946 306 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 C19orf43Q9BQ61 176 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 CXXC4Q9H2H0 198 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 MED9Q9NWA0 146 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 SLC23A1Q9UHI7 598 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 TIMM9Q9Y5J7 89 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 LRRK2Q5S007 2527 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 A0A1W2PNV4 684 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 C5orf52A6NGY3 159 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 SDCBPO00560 298 aaPredicted RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 SLC31A2O15432 143 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 KLK8O60259 260 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 FOXH1O75593 365 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 CTSBP07858 339 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 INHBBP09529 407 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 RPL7P18124 248 aaKnown RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 VDAC2P45880 294 aaPredicted RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 PCP4P48539 62 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 VEGFCP49767 419 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 IL13RA1P78552 427 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 HOXC5Q00444 222 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 LSAMPQ13449 338 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 LY6EQ16553 131 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 IGSF11Q5DX21 431 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 UBE2NLQ5JXB2 153 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 STEAP1BQ6NZ63 245 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 FAHD1Q6P587 224 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 TCTE3Q8IZS6 198 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 DDB2Q92466 427 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 APOBEC3DQ96AK3 386 aaPredicted RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 R3HDM4Q96D70 268 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 ASB9Q96DX5 294 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 SCMH1Q96GD3 660 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 POM121L2Q96KW2 1035 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 TOLLIPQ9H0E2 274 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 PRDM13Q9H4Q3 707 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 COA4Q9NYJ1 87 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 IL36GQ9NZH8 169 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 INSIG2Q9Y5U4 225 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 FN1P02751 2386 aaKnown RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 IGHV3OR15-7A0A075B7D8 119 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 A0A1W2PPV9 198 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 CTDSP2O14595 271 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 TIMM23O14925 209 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 NUPL2O15504 423 aaKnown RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 OR2J3O76001 311 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 PEX11BO96011 259 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 NRASP01111 189 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 GYPAP02724 150 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 THBDP07204 575 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 AGAP20933 346 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 LAP3P28838 519 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF93P35789 620 aaPredicted RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 RPL13AP40429 203 aaKnown RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF133P52736 654 aaPredicted RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 DLX5P56178 289 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 TAS2R45P59539 299 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 LCN6P62502 163 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 HBA1P69905 142 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 OXA1LQ15070 435 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 RGNQ15493 299 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 SLC9A3R2Q15599 337 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 MAJINQ3KP22 176 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 SYT14P1Q58G82 188 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 NSUN5P2Q63ZY6 315 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 VWA1Q6PCB0 445 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 PAQR6Q6TCH4 344 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 CYP4V2Q6ZWL3 525 aaPredicted RBP2.6□□□□□ -1.99
NEDD4-208ENST00000508342 SERPINA11Q86U17 422 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 WFDC3Q8IUB2 231 aa2.6□□□□□ -1.99
NEDD4-208ENST00000508342 ZNF439Q8NDP4 499 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms