RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 CDCP2Q5VXM1 449 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 ARL9Q6T311 187 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 TMEM173Q86WV6 379 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 IQCF1Q8N6M8 205 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 ZNF709Q8N972 641 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 Q8N976 141 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 APCDD1LQ8NCL9 501 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 OR51G1Q8NGK1 321 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 SLC25A40Q8TBP6 338 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 VN1R17PQ8TDU5 208 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 ZNF418Q8TF45 676 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 WBP2Q969T9 261 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 RSG1Q9BU20 258 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 RSPO3Q9BXY4 272 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 FBXL17Q9UF56 701 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 OR5V1Q9UGF6 321 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 ERG28Q9UKR5 140 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 MRPS28Q9Y2Q9 187 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 WSB1Q9Y6I7 421 aa9.49□□□□□ -0.89
PDLIM5-210ENST00000508216 BORCS7-ASMTA0A0B4J1R7 106 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 A0A0G2JMM0 328 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 A0A1W2PPB8 328 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 KIR3DP1A8MWS1 328 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 FTH1P19P0C7X4 201 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 PSG2P11465 335 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 ATP6V0CP27449 155 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 ADORA2BP29275 332 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 P2RY1P47900 373 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 RPL34P49207 117 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 HINT1P49773 126 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 PLCXD2Q0VAA5 305 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 IAH1Q2TAA2 248 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 GCSAMLQ5JQS6 135 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 AMMECR1LQ6DCA0 310 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 Q6ZVH6 145 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 OR5A1Q8NGJ0 315 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 OR52E5Q8NH55 327 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 CMTM2Q8TAZ6 248 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 UBTD2Q8WUN7 234 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 SKA2Q8WVK7 121 aaPredicted RBP9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 UHRF2Q96PU4 802 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 SLC25A51Q9H1U9 297 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 ISG20L2Q9H9L3 353 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 PATZ1Q9HBE1 687 aaKnown RBP9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 SS18L2Q9UHA2 77 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 PRSS50Q9UI38 385 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 ST6GALNAC2Q9UJ37 374 aa9.48□□□□□ -0.89
PDLIM5-210ENST00000508216 GAGE12HA6NDE8 117 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 NPEPPSL1A6NEC2 478 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 F8WDY8 70 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 J3QR89 54 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 SIRPB1O00241 398 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 HCRTO43612 131 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 PTHLHP12272 177 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 AMD1P17707 334 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 GNG4P50150 75 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 LIM2P55344 173 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 RND3P61587 244 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 PSG9Q00887 426 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 ZFP36L1Q07352 338 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 ELOCQ15369 112 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 ANKRD55Q3KP44 614 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 ZNF621Q6ZSS3 439 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 RYBPQ8N488 228 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 RPS4Y2Q8TD47 263 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 MBD6Q96DN6 1003 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 STARD4Q96DR4 205 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 SMIM19Q96E16 107 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 GTSF1LQ9H1H1 148 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 SDF2L1Q9HCN8 221 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 MRM2Q9UI43 246 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 SERTAD3Q9UJW9 196 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 V9GY05 133 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 NUP98P52948 1817 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 LOC102724200A0A096LPH7 203 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 TRBV2A0A0J9YWF9 115 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 A0A1W2PS29 197 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 CD3DP04234 171 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 TNFRSF1BP20333 461 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 PYCR1P32322 319 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 SRP14P37108 136 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 GDF5P43026 501 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 GPM6AP51674 278 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 SIRPAP78324 504 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 PPP1R1AQ13522 171 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 ICAM4Q14773 271 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 RAB30Q15771 203 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 GGTA1PQ4G0N0 100 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 ZNF787Q6DD87 383 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 CLEC10AQ8IUN9 316 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 C2orf73Q8N5S3 287 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 NEIL2Q969S2 332 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 PTH2Q96A98 100 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 DERL3Q96Q80 235 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 GFI1Q99684 422 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 AGMATQ9BSE5 352 aa9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 MCTS1Q9ULC4 181 aaKnown RBP9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 BOKQ9UMX3 212 aaPredicted RBP9.47□□□□□ -0.89
PDLIM5-210ENST00000508216 TICRRQ7Z2Z1 1910 aa9.46□□□□□ -0.89
PDLIM5-210ENST00000508216 FIGNL2A6NMB9 653 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms