RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 Q96M66 194 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 KLHDC3Q9BQ90 382 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 NIPSNAP3BQ9BS92 247 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 GGACTQ9BVM4 153 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 PAPOLGQ9BWT3 736 aaKnown RBP4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 SMIM3Q9BZL3 60 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 TGIF2Q9GZN2 237 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 NRSN2Q9GZP1 204 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 VN1R1Q9GZP7 353 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 HIPK2Q9H2X6 1198 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 NELFAQ9H3P2 528 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 PLEKHF2Q9H8W4 249 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 CERS4Q9HA82 394 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 KLRF1Q9NZS2 232 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 RNF150Q9ULK6 438 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 LRP4O75096 1905 aa4.34□□□□□ -1.71
HMGB3P16-201ENST00000508037 MPDZO75970 2070 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 DOCK9Q9BZ29 2069 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 CPAMD8Q8IZJ3 1885 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 TMEM131Q92545 1883 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 COL5A1P20908 1838 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 A0A087WZY1 265 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 IGKV1D-43A0A0B4J1Z2 117 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 TRAV1-1A0A0B4J248 108 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 IGHV5-51A0A0C4DH38 117 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 IGKV1-9A0A0C4DH69 117 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 A0A1W2PPE2 198 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 AQP7P3A6NL99 342 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 H3BQ15 152 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 PPIHO43447 177 aaKnown RBP4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 TRAF3IP2O43734 574 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 DUX1O43812 170 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 DFFBO76075 338 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 DIRAS3O95661 229 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 PTBP3O95758 552 aaKnown RBP4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 IFNA1P01562 189 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 IGLV3-1P01715 115 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 CA3P07451 260 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 HEXBP07686 556 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 CYC1P08574 325 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 QDPRP09417 244 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR5AC1P0C628 307 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR13C7P0DN81 318 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 CEACAM1P13688 526 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 IL11P20809 199 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 GABRR1P24046 479 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 LMO1P25800 156 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 AKR1C3P42330 323 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 NKX2-1P43699 371 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 RBP2P50120 134 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 GFERP55789 205 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 NDUFA6P56556 154 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR2B8PP59922 312 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 PKIAP61925 76 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 HNRNPKP61978 463 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 H3F3AP84243 136 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 EWSR1Q01844 656 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 TAF9Q16594 264 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 HIST3H3Q16695 136 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 KHDC3LQ587J8 217 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZNF506Q5JVG8 444 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 ACER2Q5QJU3 275 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 C9orf50Q5SZB4 431 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 C10orf128Q5T292 105 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 TMEM211Q6ICI0 200 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 OGFOD3Q6PK18 319 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 TMEM182Q6ZP80 229 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 FOXL2NBQ6ZUU3 175 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZNF429Q86V71 674 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 WDR5BQ86VZ2 330 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 C17orf82Q86X59 251 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 C1orf87Q8N0U7 546 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 D2HGDHQ8N465 521 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 TMEM156Q8N614 296 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR2C3Q8N628 320 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 HSD17B11Q8NBQ5 300 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 APCDD1LQ8NCL9 501 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 OR2G3Q8NGZ4 309 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 M1APQ8TC57 530 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 LMX1AQ8TE12 382 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 RNF138Q8WVD3 245 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 MR1Q95460 341 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 IL22RA2Q969J5 263 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 CPNE4Q96A23 557 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 ISOC2Q96AB3 205 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 S100PBPQ96BU1 408 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 MOB3AQ96BX8 217 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 MUCL1Q96DR8 90 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 DNAJA3Q96EY1 480 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 BOD1Q96IK1 185 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 GNRHR2Q96P88 292 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 IP6K3Q96PC2 410 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 SPACA5Q96QH8 159 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 PIGQQ9BRB3 760 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 RSRP1Q9BUV0 290 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 EMC6Q9BV81 110 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 SCRT1Q9BWW7 348 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 CTDSP1Q9GZU7 261 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 ZNF700Q9H0M5 742 aa4.33□□□□□ -1.72
HMGB3P16-201ENST00000508037 PCED1AQ9H1Q7 454 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms