RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 RHEBQ15382 184 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 OR2M3Q8NG83 312 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 TCTEX1D2Q8WW35 142 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 PP6455Q8WZ26 134 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 C18orf12Q96KH6 178 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 WDR77Q9BQA1 342 aaPredicted RBP11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 ABHD14AQ9BUJ0 271 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 CHRDQ9H2X0 955 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 KCNIP3Q9Y2W7 256 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 HDGFL3Q9Y3E1 203 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 IGHV3-15A0A0B4J1V0 119 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 A0A0U1RQV5 110 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 AQP7P3A6NL99 342 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 DUX1O43812 170 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 TIAF1O95411 115 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 MSR1P21757 451 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 ITGA3P26006 1051 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 SUCLG1P53597 346 aaKnown RBP11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 MTCP1P56278 107 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 STARD6P59095 220 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 ARL6IP1Q15041 203 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 FBXW12Q6X9E4 464 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 OR2AE1Q8NHA4 323 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 SLC22A8Q8TCC7 542 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 MALSU1Q96EH3 234 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 YPEL4Q96NS1 127 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 SLC2A9Q9NRM0 540 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 NECAP2Q9NVZ3 263 aa11.69□□□□□ -0.54
SNCAIP-209ENST00000508017 IGKV1-27A0A075B6S5 117 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 NSG1A0A0A6YYJ2 146 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 FAM230AA0A1W2PPH8 454 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 YIF1AO95070 293 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 OR2C1O95371 312 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 PNLIPP16233 465 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 MSX1P28360 303 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 ZNF133P52736 654 aaPredicted RBP11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 EIF3IQ13347 325 aaKnown RBP11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 CLINT1Q14677 625 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 LIAT1Q6ZQX7 453 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 ZNF727A8MUV8 499 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 K7N7A8 449 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 HNRNPKP61978 463 aaKnown RBP eCLIP11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 LSM6P62312 80 aaKnown RBP11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 GPR157Q5UAW9 335 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 PRAMEF20Q5VT98 475 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 RTL6Q6ICC9 239 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 SLC22A25Q6T423 547 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 WDSUB1Q8N9V3 476 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 GJC3Q8NFK1 279 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 TSTD1Q8NFU3 115 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 NABP1Q96AH0 204 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 MSI2Q96DH6 328 aaKnown RBP11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 GALNT14Q96FL9 552 aa11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 STRAPQ9Y3F4 350 aaKnown RBP11.68□□□□□ -0.54
SNCAIP-209ENST00000508017 CDRT15L2A8MXV6 281 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 M0R135 149 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 DUSP1P28562 367 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 PDCD1Q15116 288 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 RSU1Q15404 277 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 PIGYQ3MUY2 71 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 HEPN1Q6WQI6 88 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 SLAMF9Q96A28 289 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 SGK3Q96BR1 496 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 ZNF799Q96GE5 643 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 ZNF385AQ96PM9 386 aaKnown RBP11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 PBDC1Q9BVG4 233 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 TGIF2Q9GZN2 237 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 NELFAQ9H3P2 528 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 MMP24Q9Y5R2 645 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 IGLV3-32A0A0A0MS00 114 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 C2CD4DB7Z1M9 353 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 ST8SIA3O43173 380 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 PHF1O43189 567 aaPredicted RBP11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 CHATP28329 748 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 EWSR1Q01844 656 aaKnown RBP eCLIP11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 SOHLH1Q5JUK2 328 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 MEX3BQ6ZN04 569 aaKnown RBP11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 SUMF2Q8NBJ7 301 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 ZNF837Q96EG3 531 aaPredicted RBP11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 GGACTQ9BVM4 153 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 MYOTQ9UBF9 498 aa11.67□□□□□ -0.54
SNCAIP-209ENST00000508017 FAM24AA6NFZ4 105 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 IFITM10A6NMD0 228 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 GEMIN2O14893 280 aaKnown RBP11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 PIAS2O75928 621 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 LTBRP36941 435 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 GUCA1AP43080 201 aaPredicted RBP11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 RPS10P46783 165 aaKnown RBP11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 RAB5CP51148 216 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 CEBPGP53567 150 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 KIAA0141Q14154 515 aaPredicted RBP11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 IL13RA2Q14627 380 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 HAGHQ16775 308 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 NKAIN1Q4KMZ8 207 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 CDPF1Q6NVV7 123 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 Q6ZPA2 131 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 SLC35G3Q8N808 338 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 LRTM2Q8N967 370 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 SUMF1Q8NBK3 374 aa11.66□□□□□ -0.54
SNCAIP-209ENST00000508017 MR1Q95460 341 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms