RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 CD2P06729 351 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 VHLP40337 213 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 WNT4P56705 351 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 DGUOKQ16854 277 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 PRR31Q5SQ13 230 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 SERPINA12Q8IW75 414 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 BPIFB2Q8N4F0 458 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 ZNRF1Q8ND25 227 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 OR5D14Q8NGL3 314 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 RPS4Y2Q8TD47 263 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 PCGF1Q9BSM1 259 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 HES4Q9HCC6 221 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 MTCH1Q9NZJ7 389 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 RPUSD1Q9UJJ7 312 aaKnown RBP10.84□□□□□ -0.67
TCOF1-209ENST00000506630 ERGIC3Q9Y282 383 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 ZNF281Q9Y2X9 895 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 KIAA2026Q5HYC2 2103 aa10.84□□□□□ -0.67
TCOF1-209ENST00000506630 ZNF879B4DU55 563 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 OGG1O15527 345 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 MT-ND2P03891 347 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 LIPFP07098 398 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 PPIAL4GP0DN37 164 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 TAS2R43P59537 309 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 ERVK11-1P61568 191 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 C11orf91Q3C1V1 193 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 PDLIM3Q53GG5 364 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-209ENST00000506630 AWAT1Q58HT5 328 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 KLF17Q5JT82 389 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-209ENST00000506630 METTL11BQ5VVY1 283 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 DMKNQ6E0U4 476 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-209ENST00000506630 MKXQ8IYA7 352 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 PARP16Q8N5Y8 322 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 ZNF485Q8NCK3 441 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 OR5D18Q8NGL1 313 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 OR13C5Q8NGS8 318 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 C22orf15Q8WYQ4 148 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 EMG1Q92979 244 aaKnown RBP10.83□□□□□ -0.68
TCOF1-209ENST00000506630 MYDGFQ969H8 173 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 TMEM106AQ96A25 262 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 SDSLQ96GA7 329 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 CNBD2Q96M20 576 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 SLC6A7Q99884 636 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 DCTN5Q9BTE1 182 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 SUCNR1Q9BXA5 334 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 ELL3Q9HB65 397 aaPredicted RBP10.83□□□□□ -0.68
TCOF1-209ENST00000506630 TAS2R4Q9NYW5 299 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 ONECUT1Q9UBC0 465 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 NUP50Q9UKX7 468 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 TPRKBQ9Y3C4 175 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 MAB21L2Q9Y586 359 aa10.83□□□□□ -0.68
TCOF1-209ENST00000506630 A0A1W2PQ09 198 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 F8VVB4 439 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 F8VWA3 439 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 MAGEB3O15480 346 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 ANGPTL7O43827 346 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 TOX4O94842 621 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 KNG1P01042 644 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 SFTPBP07988 381 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 IGHV4-38-2P0DP08 117 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 RAB3AP20336 220 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 BCL3P20749 454 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 PRDX2P32119 198 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 SNU13P55769 128 aaKnown RBP10.82□□□□□ -0.68
TCOF1-209ENST00000506630 CAV3P56539 151 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 ARF6P62330 175 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 PDZK1IP1Q13113 114 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 FIP1L1Q6UN15 594 aaKnown RBP10.82□□□□□ -0.68
TCOF1-209ENST00000506630 SHISA2Q6UWI4 295 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 RNF144BQ7Z419 303 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 Q8IYB0 196 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 ZNF561Q8N587 486 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 CD177Q8N6Q3 437 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 NANOGP1Q8N7R0 232 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 SGCDQ92629 289 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 GHSRQ92847 366 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 UPRTQ96BW1 309 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 PGLYRP3Q96LB9 341 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 WDFY2Q96P53 400 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 MND1Q9BWT6 205 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 ZNF696Q9H7X3 374 aa10.82□□□□□ -0.68
TCOF1-209ENST00000506630 RBFOX1Q9NWB1 397 aaKnown RBP10.82□□□□□ -0.68
TCOF1-209ENST00000506630 PAK1IP1Q9NWT1 392 aaPredicted RBP10.82□□□□□ -0.68
TCOF1-209ENST00000506630 RRP15Q9Y3B9 282 aaKnown RBP10.82□□□□□ -0.68
TCOF1-209ENST00000506630 CALCBP10092 127 aa10.81□□□□□ -0.68
TCOF1-209ENST00000506630 PRKACAP17612 351 aa10.81□□□□□ -0.68
TCOF1-209ENST00000506630 FPR2P25090 351 aa10.81□□□□□ -0.68
TCOF1-209ENST00000506630 NPBWR2P48146 333 aa10.81□□□□□ -0.68
TCOF1-209ENST00000506630 PPP3R1P63098 170 aa10.81□□□□□ -0.68
TCOF1-209ENST00000506630 KISS1Q15726 138 aa10.81□□□□□ -0.68
TCOF1-209ENST00000506630 YIF1BQ5BJH7 314 aa10.81□□□□□ -0.68
TCOF1-209ENST00000506630 GPR157Q5UAW9 335 aa10.81□□□□□ -0.68
TCOF1-209ENST00000506630 ASPHD2Q6ICH7 369 aa10.81□□□□□ -0.68
TCOF1-209ENST00000506630 SATL1Q86VE3 508 aa10.81□□□□□ -0.68
TCOF1-209ENST00000506630 FAM185AQ8N0U4 392 aa10.81□□□□□ -0.68
TCOF1-209ENST00000506630 FAM58AQ8N1B3 248 aa10.81□□□□□ -0.68
TCOF1-209ENST00000506630 ASCC1Q8N9N2 400 aaKnown RBP10.81□□□□□ -0.68
TCOF1-209ENST00000506630 OR51A2Q8NGJ7 313 aa10.81□□□□□ -0.68
TCOF1-209ENST00000506630 CPNE2Q96FN4 548 aaPredicted RBP10.81□□□□□ -0.68
TCOF1-209ENST00000506630 TBX15Q96SF7 602 aa10.81□□□□□ -0.68
TCOF1-209ENST00000506630 GPER1Q99527 375 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms