RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 ST3GAL3Q11203 375 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 ASPHD1Q5U4P2 390 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 CYP2R1Q6VVX0 501 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 ZDHHC21Q8IVQ6 265 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 OFCC1Q8IZS5 231 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 RPP25LQ8N5L8 163 aaKnown RBP5.43□□□□□ -1.54
VCAN-206ENST00000505615 COMMD1Q8N668 190 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 OR2AJ1Q8NGZ0 328 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 NDNFQ8TB73 568 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 SLC26A7Q8TE54 656 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 CAPSLQ8WWF8 208 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 RASSF5Q8WWW0 418 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 OR5P3Q8WZ94 311 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 MICU1Q9BPX6 476 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 FUZQ9BT04 418 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 RTL8AQ9BWD3 113 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 C1orf21Q9H246 121 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 KAT8Q9H7Z6 458 aaKnown RBP5.43□□□□□ -1.54
VCAN-206ENST00000505615 ISYNA1Q9NPH2 558 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 SIGLEC7Q9Y286 467 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 IER3IP1Q9Y5U9 82 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 X6R8D5 127 aa5.43□□□□□ -1.54
VCAN-206ENST00000505615 A0A087WUU8 490 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 A8MZ25 164 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 M0QZK8 103 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 CCRL2O00421 344 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 FFAR1O14842 300 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 NDUFB2O95178 105 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 ACKR3P25106 362 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 ACTA2P62736 377 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 ACTG2P63267 376 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 ACTC1P68032 377 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 ACTA1P68133 377 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 PRDX4Q13162 271 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 IL18R1Q13478 541 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 SNAPC1Q16533 368 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 SLC36A3Q495N2 470 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 DNM1P34Q6PK57 102 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 TBPL2Q6SJ96 375 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 ACP7Q6ZNF0 438 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 PRSS45Q7RTY3 260 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 DHDDSQ86SQ9 333 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 STPG2Q8N412 459 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 ZNF561Q8N587 486 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 FAM71E2Q8N5Q1 922 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 EIF1ADQ8N9N8 165 aaKnown RBP5.42□□□□□ -1.54
VCAN-206ENST00000505615 FAM162AQ96A26 154 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 SGK3Q96BR1 496 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 REEP6Q96HR9 211 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 OR8B4Q96RC9 309 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 CDRT15Q96T59 188 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 ATP6V0BQ99437 205 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 CGREF1Q99674 301 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 ZNF319Q9P2F9 582 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 KCNG2Q9UJ96 466 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 BAG5Q9UL15 447 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 MOB4Q9Y3A3 225 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 HSPE1-MOB4S4R3N1 261 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 FAT2Q9NYQ8 4349 aa5.42□□□□□ -1.54
VCAN-206ENST00000505615 ANXA2P2A6NMY6 339 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 ZNF850A8MQ14 1090 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 FAM25EA8MYX2 175 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 J3KTA2 159 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 SLC22A2O15244 555 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 TROVE2P10155 538 aaKnown RBP eCLIP5.41□□□□□ -1.54
VCAN-206ENST00000505615 HTR1DP28221 377 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 YAP1P46937 504 aaKnown RBP5.41□□□□□ -1.54
VCAN-206ENST00000505615 CDX1P47902 265 aaPredicted RBP5.41□□□□□ -1.54
VCAN-206ENST00000505615 SRSF7Q16629 238 aaKnown RBP eCLIP5.41□□□□□ -1.54
VCAN-206ENST00000505615 HAGHQ16775 308 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 FAM27D1Q5T7N8 215 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 SMARCD3Q6STE5 483 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 BAIAP2L2Q6UXY1 529 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 MBOAT2Q6ZWT7 520 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 ZNF429Q86V71 674 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 RNF113BQ8IZP6 322 aaKnown RBP5.41□□□□□ -1.54
VCAN-206ENST00000505615 DRAM1Q8N682 238 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 C5orf56Q8N8D9 126 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 CSNK2A3Q8NEV1 391 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 OR10A6Q8NH74 314 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 IL17DQ8TAD2 202 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 C4orf3Q8WVX3 66 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 RNF170Q96K19 258 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 NMNAT3Q96T66 252 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 COPS4Q9BT78 406 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 CLEC7AQ9BXN2 247 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 TEX12Q9BXU0 123 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 OR51I2Q9H344 312 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 FN3KQ9H479 309 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 RPRD1BQ9NQG5 326 aaKnown RBP5.41□□□□□ -1.54
VCAN-206ENST00000505615 THAP1Q9NVV9 213 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 CCDC167Q9P0B6 97 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 KIAA1456Q9P272 454 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 DPM3Q9P2X0 92 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 RHCGQ9UBD6 479 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 N6AMT1Q9Y5N5 214 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 MPC1Q9Y5U8 109 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 SIRT4Q9Y6E7 314 aaPredicted RBP5.41□□□□□ -1.54
VCAN-206ENST00000505615 SESN1Q9Y6P5 492 aa5.41□□□□□ -1.54
VCAN-206ENST00000505615 DNAH2Q9P225 4427 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms