RNA–Protein interactions for RNA: ENST00000504889.5

SPOP-208, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-208ENST00000504889 CSPG4Q6UVK1 2322 aa4.91□□□□□ -1.62
SPOP-208ENST00000504889 MALRD1Q5VYJ5 2156 aa4.91□□□□□ -1.62
SPOP-208ENST00000504889 FBN1P35555 2871 aaKnown RBP4.9□□□□□ -1.62
SPOP-208ENST00000504889 TRBV23-1A0A0A0MS06 115 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 IGHV1-69DA0A0B4J2H0 117 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 CENPVL3A0A0U1RRI6 287 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 MEX3AA1L020 520 aaKnown RBP4.9□□□□□ -1.63
SPOP-208ENST00000504889 MEIOCA2RUB1 952 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 EFCAB10A6NFE3 127 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 OR4C45A6NMZ5 311 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 E9PI62 339 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 J3QRE1 110 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 SIRPB1O00241 398 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 SH2D1BO14796 132 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 SULT1B1O43704 296 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 ZFPL1O95159 310 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 HAND1O96004 215 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 KNG1P01042 644 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 FSHBP01225 129 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 IGHV1-69P01742 117 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 TK1P04183 234 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 CHRM2P08172 466 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 ZNF44P15621 663 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 RAB3AP20336 220 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 BCL3P20749 454 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 PRTN3P24158 256 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 DUSP1P28562 367 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 ETV1P50549 477 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 GTF2A1P52655 376 aaPredicted RBP4.9□□□□□ -1.63
SPOP-208ENST00000504889 LGALS4P56470 323 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 CAV3P56539 151 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 ISL1P61371 349 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 UBA52P62987 128 aaKnown RBP4.9□□□□□ -1.63
SPOP-208ENST00000504889 ST3GAL4Q11206 333 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 KLRD1Q13241 179 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 GRK1Q15835 563 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 ATPAF1Q5TC12 328 aaPredicted RBP4.9□□□□□ -1.63
SPOP-208ENST00000504889 OGFRL1Q5TC84 451 aaPredicted RBP4.9□□□□□ -1.63
SPOP-208ENST00000504889 NCR3LG1Q68D85 454 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 RPL22L1Q6P5R6 122 aaKnown RBP4.9□□□□□ -1.63
SPOP-208ENST00000504889 UTS2BQ765I0 119 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 FAM58AQ8N1B3 248 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 KIR3DL3Q8N743 410 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 ZFP41Q8N8Y5 198 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 DNAAF1Q8NEP3 725 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 OR5D13Q8NGL4 314 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 OR10AC1Q8NH08 325 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 PPP1R35Q8TAP8 253 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 TBC1D15Q8TC07 691 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 FAM216AQ8WUB2 273 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 NR1H4Q96RI1 486 aaPredicted RBP4.9□□□□□ -1.63
SPOP-208ENST00000504889 TBX15Q96SF7 602 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 NRIP2Q9BQI9 281 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 CCDC90BQ9GZT6 254 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 CHST6Q9GZX3 395 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 SIRPDQ9H106 197 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 METTL8Q9H825 291 aaKnown RBP4.9□□□□□ -1.63
SPOP-208ENST00000504889 ZMAT3Q9HA38 289 aaKnown RBP4.9□□□□□ -1.63
SPOP-208ENST00000504889 FGF20Q9NP95 211 aaPredicted RBP4.9□□□□□ -1.63
SPOP-208ENST00000504889 EXOSC4Q9NPD3 245 aaKnown RBP4.9□□□□□ -1.63
SPOP-208ENST00000504889 RBFOX1Q9NWB1 397 aaKnown RBP4.9□□□□□ -1.63
SPOP-208ENST00000504889 BABAM2Q9NXR7 383 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 SCN3BQ9NY72 215 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 MTCH1Q9NZJ7 389 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 DIMT1Q9UNQ2 313 aaKnown RBP4.9□□□□□ -1.63
SPOP-208ENST00000504889 ERGIC3Q9Y282 383 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 MAB21L2Q9Y586 359 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 SOX21Q9Y651 276 aaPredicted RBP4.9□□□□□ -1.63
SPOP-208ENST00000504889 MXRA5Q9NR99 2828 aa4.9□□□□□ -1.63
SPOP-208ENST00000504889 SONP18583 2426 aaKnown RBP4.89□□□□□ -1.63
SPOP-208ENST00000504889 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.89□□□□□ -1.63
SPOP-208ENST00000504889 NAV3Q8IVL0 2385 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 IGKV1-27A0A075B6S5 117 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 A0A0U1RQK1 487 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 PTGES3LE9PB15 166 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 M0R1W7 72 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 HSPB6O14558 160 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 TNFRSF13BO14836 293 aaPredicted RBP4.89□□□□□ -1.63
SPOP-208ENST00000504889 CASQ2O14958 399 aaPredicted RBP4.89□□□□□ -1.63
SPOP-208ENST00000504889 NPFFO15130 113 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 XPNPEP2O43895 674 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 NOS1APO75052 506 aaPredicted RBP4.89□□□□□ -1.63
SPOP-208ENST00000504889 WBP4O75554 376 aaKnown RBP4.89□□□□□ -1.63
SPOP-208ENST00000504889 CSTBP04080 98 aaKnown RBP4.89□□□□□ -1.63
SPOP-208ENST00000504889 FBP1P09467 338 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 GNAO1P09471 354 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 LIMS3P0CW19 117 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 LIMS4P0CW20 117 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 MMP9P14780 707 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 AMY2BP19961 511 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 COX7A1P24310 79 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 MPZP25189 248 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 NPBWR2P48146 333 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 DLX1P56177 255 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 TAS2R43P59537 309 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 ERVFRD-1P60508 538 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 ADARB1P78563 741 aaKnown RBP4.89□□□□□ -1.63
SPOP-208ENST00000504889 FOXL1Q12952 345 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 PDZK1IP1Q13113 114 aa4.89□□□□□ -1.63
SPOP-208ENST00000504889 DYNC1I2Q13409 638 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms