RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, human

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNB1-208	ENST00000504788	BTG1	P62324	171 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	CLEC12B	Q2HXU8	276 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	HFE	Q30201	348 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	TMEM155	Q4W5P6	130 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	SHE	Q5VZ18	495 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788		Q6P435	159 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788		Q6ZPA2	131 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	C17orf107	Q6ZR85	190 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	SLC25A26	Q70HW3	274 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	RTN4RL2	Q86UN3	420 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	ZNF573	Q86YE8	665 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	FGFRL1	Q8N441	504 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	FAM89B	Q8N5H3	189 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	NKAIN3	Q8N8D7	197 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	TBC1D15	Q8TC07	691 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	LRRC29	Q8WV35	223 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	C12orf43	Q96C57	262 aa	Known RBP	4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	COX4I2	Q96KJ9	171 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	EGLN1	Q9GZT9	426 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	KCNK15	Q9H427	330 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	FN3KRP	Q9HA64	309 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	BARX1	Q9HBU1	254 aa	Predicted RBP	4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	HMG20A	Q9NP66	347 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	DECR2	Q9NUI1	292 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	TEP1	Q99973	2627 aa	Known RBP	4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	KIAA2026	Q5HYC2	2103 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	MTOR	P42345	2549 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	PPIAL4E	A0A075B759	164 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	MEGF11	A6BM72	1044 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	OOEP	A6NGQ2	149 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788		A6NHS1	94 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	CEACAM18	A8MTB9	384 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788		A8MXK9	166 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	FAM157A	C9JC47	383 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	PPIAL4D	F5H284	164 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788		H3BMQ9	156 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	IFNL4	K9M1U5	179 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	AIP	O00170	330 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	LGALS8	O00214	317 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	PSPN	O60542	156 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	IL1A	P01583	271 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	PPIAL4F	P0DN26	164 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	SELL	P14151	372 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	MUC1	P15941	1255 aa	Predicted RBP	4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	TNFSF4	P23510	183 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	CD80	P33681	288 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	ATP1B3	P54709	279 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	TMBIM6	P55061	237 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	TMEM50B	P56557	158 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	CLDN12	P56749	244 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	FGF12	P61328	243 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	VBP1	P61758	197 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	PAX5	Q02548	391 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	LOXL1	Q08397	574 aa	Predicted RBP	4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	SPCS2	Q15005	226 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	DGUOK	Q16854	277 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	AVPI1	Q5T686	147 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	GPR107	Q5VW38	600 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	OR10K2	Q6IF99	312 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	TCF23	Q7RTU1	214 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	TPRA1	Q86W33	373 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	BATF2	Q8N1L9	274 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	GAPT	Q8N292	157 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	OR51F2	Q8NH61	342 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	CLDND2	Q8NHS1	167 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	DYNC2LI1	Q8TCX1	351 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	FAM168A	Q92567	244 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	SLAMF9	Q96A28	289 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	SLC25A46	Q96AG3	418 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	ISOC1	Q96CN7	298 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	SDSL	Q96GA7	329 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	CEP19	Q96LK0	163 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788		Q96M66	194 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788		Q96MF0	132 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	GAFA1	Q96PS6	74 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	KRTAP4-8	Q9BYQ9	185 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	LPAR5	Q9H1C0	372 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	IFT22	Q9H7X7	185 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	PATZ1	Q9HBE1	687 aa	Known RBP	4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	RHOF	Q9HBH0	211 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	RCC2	Q9P258	522 aa	Known RBP	4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	SLC7A11	Q9UPY5	501 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	PPIAL4A	Q9Y536	164 aa		4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	FN1	P02751	2386 aa	Known RBP	4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	SON	P18583	2426 aa	Known RBP	4.11	□□□□□ -1.75
LMNB1-208	ENST00000504788	IGHV3OR15-7	A0A075B7D8	119 aa		4.1	□□□□□ -1.75
LMNB1-208	ENST00000504788		A0A0B4J203	849 aa		4.1	□□□□□ -1.75
LMNB1-208	ENST00000504788	TRAV24	A0A0B4J272	114 aa		4.1	□□□□□ -1.75
LMNB1-208	ENST00000504788	LOC100506127	A0A0U1RQW1	187 aa		4.1	□□□□□ -1.75
LMNB1-208	ENST00000504788	TMEM82	A0PJX8	343 aa		4.1	□□□□□ -1.75
LMNB1-208	ENST00000504788	SMIM30	A4D0T7	59 aa		4.1	□□□□□ -1.75
LMNB1-208	ENST00000504788	DPPA5	A6NC42	116 aa		4.1	□□□□□ -1.75
LMNB1-208	ENST00000504788	OR2AT4	A6NND4	320 aa		4.1	□□□□□ -1.75
LMNB1-208	ENST00000504788	CLDN25	C9JDP6	229 aa		4.1	□□□□□ -1.75
LMNB1-208	ENST00000504788	PLAT	P00750	562 aa		4.1	□□□□□ -1.75
LMNB1-208	ENST00000504788	ERCC1	P07992	297 aa	Predicted RBP	4.1	□□□□□ -1.75
LMNB1-208	ENST00000504788	HCK	P08631	526 aa		4.1	□□□□□ -1.75

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