RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 OR8U9P0C7N5 309 aa9.63□□□□□ -0.87
LSM6-204ENST00000504181 GRB2P62993 217 aaKnown RBP9.63□□□□□ -0.87
LSM6-204ENST00000504181 CFHR3Q02985 330 aa9.63□□□□□ -0.87
LSM6-204ENST00000504181 LRRC23Q53EV4 343 aaPredicted RBP9.63□□□□□ -0.87
LSM6-204ENST00000504181 TRAPPC6BQ86SZ2 158 aa9.63□□□□□ -0.87
LSM6-204ENST00000504181 ZNRF4Q8WWF5 429 aa9.63□□□□□ -0.87
LSM6-204ENST00000504181 OR4C12Q96R67 309 aa9.63□□□□□ -0.87
LSM6-204ENST00000504181 ALX4Q9H161 411 aaPredicted RBP9.63□□□□□ -0.87
LSM6-204ENST00000504181 ACTR3BQ9P1U1 418 aa9.63□□□□□ -0.87
LSM6-204ENST00000504181 CEPT1Q9Y6K0 416 aa9.63□□□□□ -0.87
LSM6-204ENST00000504181 COMMD3-BMI1R4GMX3 469 aa9.63□□□□□ -0.87
LSM6-204ENST00000504181 DNAH2Q9P225 4427 aa9.63□□□□□ -0.87
LSM6-204ENST00000504181 PKD1P98161 4303 aa9.63□□□□□ -0.87
LSM6-204ENST00000504181 TOR1AO14656 332 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 RRP9O43818 475 aaKnown RBP9.62□□□□□ -0.87
LSM6-204ENST00000504181 ZNF737O75373 536 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 VDAC1P21796 283 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 SLC15A1P46059 708 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 PITPNAQ00169 270 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 RUNX1Q01196 453 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 CEACAM21Q3KPI0 293 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 OR52W1Q6IF63 320 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 OR8H2Q8N162 312 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 ZNF491Q8N8L2 437 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 PROKR2Q8NFJ6 384 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 OR51L1Q8NGJ5 315 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 MYOZ3Q8TDC0 251 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 TOMM40LQ969M1 308 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 ITFG2Q969R8 447 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 CREB3L1Q96BA8 519 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 UBE2E2Q96LR5 201 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 PARD6BQ9BYG5 372 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 VSIG4Q9Y279 399 aa9.62□□□□□ -0.87
LSM6-204ENST00000504181 DNAH17Q9UFH2 4485 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 A0A1B0GVY2 172 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 DHRS12A0PJE2 317 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 UNC119BA6NIH7 251 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 OOSP1A8MZH6 123 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 IFNA14P01570 189 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 IGKV1D-33P01593 117 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 IGKV1-33P01594 117 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 CDK2P24941 298 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 GDNFP39905 211 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 FGD3Q5JSP0 725 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 LGALS9CQ6DKI2 356 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 CEMP1Q6PRD7 247 aaPredicted RBP9.61□□□□□ -0.87
LSM6-204ENST00000504181 MOB3CQ70IA8 216 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 FANK1Q8TC84 345 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 RPEQ96AT9 228 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 ZBTB9Q96C00 473 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 HRASLS5Q96KN8 279 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 RSRP1Q9BUV0 290 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 ABCG5Q9H222 651 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 KLK15Q9H2R5 256 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 RGCCQ9H4X1 137 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 RABEP2Q9H5N1 569 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 VIPAS39Q9H9C1 493 aa9.61□□□□□ -0.87
LSM6-204ENST00000504181 OR5B21A6NL26 309 aa9.6□□□□□ -0.87
LSM6-204ENST00000504181 NCBP2LA6PVI3 153 aaKnown RBP9.6□□□□□ -0.87
LSM6-204ENST00000504181 KIR3DL2P43630 455 aa9.6□□□□□ -0.87
LSM6-204ENST00000504181 HAAOP46952 286 aa9.6□□□□□ -0.87
LSM6-204ENST00000504181 KIAA0141Q14154 515 aaPredicted RBP9.6□□□□□ -0.87
LSM6-204ENST00000504181 KRT71Q3SY84 523 aa9.6□□□□□ -0.87
LSM6-204ENST00000504181 PLCXD3Q63HM9 321 aa9.6□□□□□ -0.87
LSM6-204ENST00000504181 TMEM65Q6PI78 240 aa9.6□□□□□ -0.87
LSM6-204ENST00000504181 OR5A2Q8NGI9 324 aa9.6□□□□□ -0.87
LSM6-204ENST00000504181 FAM81AQ8TBF8 368 aa9.6□□□□□ -0.87
LSM6-204ENST00000504181 C16orf45Q96MC5 204 aaPredicted RBP9.6□□□□□ -0.87
LSM6-204ENST00000504181 KCTD7Q96MP8 289 aa9.6□□□□□ -0.87
LSM6-204ENST00000504181 IFT27Q9BW83 186 aa9.6□□□□□ -0.87
LSM6-204ENST00000504181 ROPN1BQ9BZX4 212 aaPredicted RBP9.6□□□□□ -0.87
LSM6-204ENST00000504181 CHST6Q9GZX3 395 aa9.6□□□□□ -0.87
LSM6-204ENST00000504181 OR51J1Q9H342 316 aa9.6□□□□□ -0.87
LSM6-204ENST00000504181 ROPN1Q9HAT0 212 aaPredicted RBP9.6□□□□□ -0.87
LSM6-204ENST00000504181 HES4Q9HCC6 221 aa9.6□□□□□ -0.87
LSM6-204ENST00000504181 DNAJB9Q9UBS3 223 aa9.6□□□□□ -0.87
LSM6-204ENST00000504181 DNAH11Q96DT5 4516 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 HSPG2P98160 4391 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 A0A1W2PPI3 338 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 TMEM82A0PJX8 343 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 LINC01619G3V211 115 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 J3QT63 122 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 ZNF593O00488 134 aaPredicted RBP9.59□□□□□ -0.87
LSM6-204ENST00000504181 ARPC3O15145 178 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 NOS1APO75052 506 aaPredicted RBP9.59□□□□□ -0.87
LSM6-204ENST00000504181 IGLV1-51P01701 117 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 APOC1P02654 83 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 CD34P28906 385 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 SLC6A6P31641 620 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 OMPP47874 163 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 PRRX1P54821 245 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 SELENOWP63302 87 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.59□□□□□ -0.87
LSM6-204ENST00000504181 SLC35F1Q5T1Q4 408 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 UTF1Q5T230 341 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 EPGNQ6UW88 154 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 VTCN1Q7Z7D3 282 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 ANKRD13BQ86YJ7 626 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 TGIF2LXQ8IUE1 241 aa9.59□□□□□ -0.87
LSM6-204ENST00000504181 ZNF511Q8NB15 262 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms