RNA–Protein interactions for RNA: ENST00000503564.5

POLR2J3-207, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 875 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-207ENST00000503564 CXCR4P61073 352 aa11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 ESRRGP62508 458 aa11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 ACTA2P62736 377 aa11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 ACTG2P63267 376 aa11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 ACTC1P68032 377 aa11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 ACTA1P68133 377 aa11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 TCTEX1D4Q5JR98 221 aa11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 MINOS1Q5TGZ0 78 aa11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 AQP12AQ8IXF9 295 aa11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 TRMT10AQ8TBZ6 339 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 APOL4Q9BPW4 351 aa11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 TEX12Q9BXU0 123 aa11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 ADGRL4Q9HBW9 690 aa11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 MTCH1Q9NZJ7 389 aa11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 MRM2Q9UI43 246 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 OR52A1Q9UKL2 312 aa11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 GTF2A1LQ9UNN4 478 aa11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 HILPDAQ9Y5L2 63 aa11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 MINOS1-NBL1R4GNA1 71 aa11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 KMT2CQ8NEZ4 4911 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-207ENST00000503564 IGKV1-27A0A075B6S5 117 aa11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 IGHV2-26A0A0B4J1V2 119 aa11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 A0A1W2PRX2 142 aa11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 MPIG6BO95866 241 aa11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 CD33P20138 364 aa11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 CALB2P22676 271 aa11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 AZGP1P25311 298 aaKnown RBP11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 CRISP1P54107 249 aa11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 OR12D2P58182 307 aa11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 MEF2CQ06413 473 aaPredicted RBP11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 SLC34A1Q06495 639 aa11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 DYNC1I2Q13409 638 aaKnown RBP11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 ARSJQ5FYB0 599 aaPredicted RBP11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 GDPD3Q7L5L3 318 aa11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 BCDIN3DQ7Z5W3 292 aaKnown RBP11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 OR5AU1Q8NGC0 362 aa11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 CEP19Q96LK0 163 aa11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 CADM1Q9BY67 442 aaKnown RBP11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 IL36RNQ9UBH0 155 aa11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 SNX5Q9Y5X3 404 aa11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 SESN1Q9Y6P5 492 aa11.32□□□□□ -0.6
POLR2J3-207ENST00000503564 NBEAL2Q6ZNJ1 2754 aa11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 M0R129 80 aa11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 ATP8B1O43520 1251 aa11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 EDDM3AQ14507 147 aa11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 UBE2V2Q15819 145 aa11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 KIAA2026Q5HYC2 2103 aa11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 VAX1Q5SQQ9 334 aa11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 SLC35F2Q8IXU6 374 aa11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 ZNF676Q8N7Q3 588 aa11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 TPRX1Q8N7U7 411 aa11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 OR52N4Q8NGI2 321 aa11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 OR4P4Q8NGL7 312 aa11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 SLAMF9Q96A28 289 aa11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 SNX22Q96L94 193 aa11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 MNTQ99583 582 aa11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 CLEC7AQ9BXN2 247 aa11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 SEBOXQ9HB31 216 aaPredicted RBP11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 PAPOLBQ9NRJ5 636 aaKnown RBP11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 LINC00312Q9Y6C7 94 aa11.31□□□□□ -0.6
POLR2J3-207ENST00000503564 FAM230AA0A1W2PPH8 454 aa11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 hADV38S2A0JD32 116 aa11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 FKBP6O75344 327 aa11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 MMP23AO75900 390 aa11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 DNAJC8O75937 253 aaPredicted RBP11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 IGHA1P01876 353 aa11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 PF4V1P10720 104 aa11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 HOXB6P17509 224 aaKnown RBP11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 ZNF91Q05481 1191 aa11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 PTGES3Q15185 160 aaKnown RBP11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 AADACL4Q5VUY2 407 aa11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 C11orf87Q6NUJ2 197 aa11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 FAHD1Q6P587 224 aa11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 MEPCEQ7L2J0 689 aaKnown RBP11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 SSX6Q7RTT6 188 aa11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 C16orf82Q7Z2V1 217 aa11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 NDNFQ8TB73 568 aa11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 DNAJC9Q8WXX5 260 aa11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 CHST5Q9GZS9 411 aa11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 TMEM133Q9H2Q1 129 aa11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 CLN6Q9NWW5 311 aa11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 SLC7A11Q9UPY5 501 aa11.3□□□□□ -0.6
POLR2J3-207ENST00000503564 PSPNO60542 156 aa11.29□□□□□ -0.6
POLR2J3-207ENST00000503564 HAND1O96004 215 aa11.29□□□□□ -0.6
POLR2J3-207ENST00000503564 DAPP51397 102 aa11.29□□□□□ -0.6
POLR2J3-207ENST00000503564 KRTAP10-11P60412 298 aa11.29□□□□□ -0.6
POLR2J3-207ENST00000503564 ACTR3P61158 418 aa11.29□□□□□ -0.6
POLR2J3-207ENST00000503564 SLC35A2P78381 396 aa11.29□□□□□ -0.6
POLR2J3-207ENST00000503564 CBX1P83916 185 aa11.29□□□□□ -0.6
POLR2J3-207ENST00000503564 EFNB1P98172 346 aa11.29□□□□□ -0.6
POLR2J3-207ENST00000503564 GRK1Q15835 563 aa11.29□□□□□ -0.6
POLR2J3-207ENST00000503564 NXNL2Q5VZ03 156 aa11.29□□□□□ -0.6
POLR2J3-207ENST00000503564 SLC25A26Q70HW3 274 aa11.29□□□□□ -0.6
POLR2J3-207ENST00000503564 CATSPERDQ86XM0 798 aa11.29□□□□□ -0.6
POLR2J3-207ENST00000503564 EMG1Q92979 244 aaKnown RBP11.29□□□□□ -0.6
POLR2J3-207ENST00000503564 THTPAQ9BU02 230 aa11.29□□□□□ -0.6
POLR2J3-207ENST00000503564 CHST6Q9GZX3 395 aa11.29□□□□□ -0.6
POLR2J3-207ENST00000503564 LIN7BQ9HAP6 207 aa11.29□□□□□ -0.6
POLR2J3-207ENST00000503564 PLEKHA1Q9HB21 404 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms