RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 PAX6P26367 422 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 GGT2P36268 569 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 TALDO1P37837 337 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 CD79BP40259 229 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 OMPP47874 163 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 GCLMP48507 274 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 NMUP48645 174 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 CCR6P51684 374 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 NDUFA8P51970 172 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 ZNF138P52744 262 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 TAS2R46P59540 309 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 UBE2NP61088 152 aaKnown RBP1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 CACNG7P62955 275 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 SLC7A9P82251 487 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 IFITM3Q01628 133 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 NAB1Q13506 487 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 EIF4EBP2Q13542 120 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 SPA17Q15506 151 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 TMEM176BQ3YBM2 270 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 SPIN4Q56A73 249 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 TTC32Q5I0X7 151 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 HHATQ5VTY9 493 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 SYPL2Q5VXT5 272 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 LAMTOR1Q6IAA8 161 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 CLEC19AQ6UXS0 136 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 CASP12Q6UXS9 341 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 TIFABQ6ZNK6 161 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 FAM92BQ6ZTR7 304 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 LINC00173Q6ZV60 143 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 STRADAQ7RTN6 431 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 C6orf120Q7Z4R8 191 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 TRAPPC5Q8IUR0 188 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 WDFY1Q8IWB7 410 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 CPNE9Q8IYJ1 553 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 C11orf72Q8NBR9 251 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 ENKURQ8TC29 256 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 HGDQ93099 445 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 TESCQ96BS2 214 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 OPTNQ96CV9 577 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 SMIM12Q96EX1 92 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 SMARCD1Q96GM5 515 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 OR10C1Q96KK4 312 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 ZNF285Q96NJ3 590 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 TAAR1Q96RJ0 339 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 SDHCQ99643 169 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 DHRS9Q9BPW9 319 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 FAAP24Q9BTP7 215 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 SLC25A2Q9BXI2 301 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 SLC25A39Q9BZJ4 359 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 LINC00597Q9H2U6 94 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 EDA2RQ9HAV5 297 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 TMEM27Q9HBJ8 222 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 C12orf4Q9NQ89 552 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 FAM206AQ9NX38 181 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 PCYOX1Q9UHG3 505 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 CD84Q9UIB8 345 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 ZNF223Q9UK11 482 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 TP53TG1Q9Y2A0 90 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 WSB1Q9Y6I7 421 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 EVC2Q86UK5 1308 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 SCN2AQ99250 2005 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 CDC42BPBQ9Y5S2 1711 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 DENND4AQ7Z401 1863 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 IGHV3-64DA0A0J9YX35 117 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 A0A0J9YXV3 536 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 TINCRA0A1B0GVN0 87 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 EFCAB9A8MZ26 197 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 C21orf140B9A014 251 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 E5RI56 91 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 TMX2-CTNND1H3BSU7 103 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 I3L4J1 428 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 KCNK1O00180 336 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 UPK2O00526 184 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 CXCR6O00574 342 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 TAAR5O14804 337 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 PSPHP1O15172 72 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 SUPT3HO75486 399 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 RP2O75695 350 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 VAMP5O95183 116 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 CTDNEP1O95476 244 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 KRT75O95678 551 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 TYMSP04818 313 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 GNAO1P09471 354 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 CD99P14209 185 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 ZNF30P17039 623 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 AKR1C4P17516 323 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 PSMA1P25786 263 aaKnown RBP1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 TSPOP30536 169 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 GRPRP30550 384 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 IFNGR2P38484 337 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 CAPZBP47756 277 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 CYB561P49447 251 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 SERPINB9P50453 376 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 IDH3GP51553 393 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 PSMD7P51665 324 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 CRISP3P54108 245 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 SLC18A1P54219 525 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 CLDN12P56749 244 aa1.56□□□□□ -2.16
HMGB1P35-201ENST00000503360 CXCR4P61073 352 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms