RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 STMN2Q93045 179 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 SLAMF9Q96A28 289 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 PKIBQ9C010 78 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 IL36RNQ9UBH0 155 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 ENOPH1Q9UHY7 261 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 GNG8Q9UK08 70 aa13.21□□□□□ -0.29
SCLT1-204ENST00000503215 H3BNX3 289 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 ENTPD6O75354 484 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 ZNF737O75373 536 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 IL24Q13007 206 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 ZIK1Q3SY52 487 aaPredicted RBP13.2□□□□□ -0.3
SCLT1-204ENST00000503215 MIDNQ504T8 468 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 DYNAPQ8N1N2 210 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 ADAT3Q96EY9 351 aaPredicted RBP13.2□□□□□ -0.3
SCLT1-204ENST00000503215 ZNF184Q99676 751 aaPredicted RBP13.2□□□□□ -0.3
SCLT1-204ENST00000503215 RBM4BQ9BQ04 359 aaKnown RBP13.2□□□□□ -0.3
SCLT1-204ENST00000503215 SLC7A11Q9UPY5 501 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 IGKV1-9A0A0C4DH69 117 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 LOC107986453A0A1B0GWG9 222 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 TMEM82A0PJX8 343 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 E9PQ18 207 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 K7N7A8 449 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 CIB2O75838 187 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 ALPLP05186 524 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 CALCBP10092 127 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 TGFBR2P37173 567 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 LDLRAD2Q5SZI1 272 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 CRIP3Q6Q6R5 217 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 SLC25A26Q70HW3 274 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 RNF144BQ7Z419 303 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 LHFPL4Q7Z7J7 247 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 ASCC1Q8N9N2 400 aaKnown RBP13.2□□□□□ -0.3
SCLT1-204ENST00000503215 OR5R1Q8NH85 324 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 PIFOQ8TCI5 191 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 CHST5Q9GZS9 411 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 MEGF9Q9H1U4 602 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 PLEKHA1Q9HB21 404 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 TCF7L1Q9HCS4 588 aa13.2□□□□□ -0.3
SCLT1-204ENST00000503215 J3QRE1 110 aa13.19□□□□□ -0.3
SCLT1-204ENST00000503215 EI24O14681 340 aa13.19□□□□□ -0.3
SCLT1-204ENST00000503215 TSPAN15O95858 294 aa13.19□□□□□ -0.3
SCLT1-204ENST00000503215 DUSP1P28562 367 aa13.19□□□□□ -0.3
SCLT1-204ENST00000503215 NPBWR2P48146 333 aa13.19□□□□□ -0.3
SCLT1-204ENST00000503215 OR12D2P58182 307 aa13.19□□□□□ -0.3
SCLT1-204ENST00000503215 NANOS3P60323 173 aaKnown RBP13.19□□□□□ -0.3
SCLT1-204ENST00000503215 TCF23Q7RTU1 214 aa13.19□□□□□ -0.3
SCLT1-204ENST00000503215 OR2G2Q8NGZ5 317 aa13.19□□□□□ -0.3
SCLT1-204ENST00000503215 OR10AC1Q8NH08 325 aa13.19□□□□□ -0.3
SCLT1-204ENST00000503215 RNFT2Q96EX2 444 aa13.19□□□□□ -0.3
SCLT1-204ENST00000503215 CEP19Q96LK0 163 aa13.19□□□□□ -0.3
SCLT1-204ENST00000503215 ADI1Q9BV57 179 aa13.19□□□□□ -0.3
SCLT1-204ENST00000503215 HEXA-AS1Q9H8Q6 139 aa13.19□□□□□ -0.3
SCLT1-204ENST00000503215 USE1Q9NZ43 259 aa13.19□□□□□ -0.3
SCLT1-204ENST00000503215 FRRS1LQ9P0K9 344 aa13.19□□□□□ -0.3
SCLT1-204ENST00000503215 SMIM31A0A1B0GVY4 71 aa13.18□□□□□ -0.3
SCLT1-204ENST00000503215 C17orf98A8MV24 154 aa13.18□□□□□ -0.3
SCLT1-204ENST00000503215 CHST1O43916 411 aa13.18□□□□□ -0.3
SCLT1-204ENST00000503215 IGHA1P01876 353 aa13.18□□□□□ -0.3
SCLT1-204ENST00000503215 RAB13P51153 203 aa13.18□□□□□ -0.3
SCLT1-204ENST00000503215 FUT6P51993 359 aa13.18□□□□□ -0.3
SCLT1-204ENST00000503215 CDC42P60953 191 aa13.18□□□□□ -0.3
SCLT1-204ENST00000503215 TMED1Q13445 227 aa13.18□□□□□ -0.3
SCLT1-204ENST00000503215 LRRC75BQ2VPJ9 315 aa13.18□□□□□ -0.3
SCLT1-204ENST00000503215 PLA1AQ53H76 456 aa13.18□□□□□ -0.3
SCLT1-204ENST00000503215 OR52N4Q8NGI2 321 aa13.18□□□□□ -0.3
SCLT1-204ENST00000503215 RFKQ969G6 155 aa13.18□□□□□ -0.3
SCLT1-204ENST00000503215 FGGYQ96C11 551 aa13.18□□□□□ -0.3
SCLT1-204ENST00000503215 HRASLS5Q96KN8 279 aa13.18□□□□□ -0.3
SCLT1-204ENST00000503215 FAM234AQ9H0X4 552 aa13.18□□□□□ -0.3
SCLT1-204ENST00000503215 RBFOX1Q9NWB1 397 aaKnown RBP13.18□□□□□ -0.3
SCLT1-204ENST00000503215 IMPAD1Q9NX62 359 aa13.18□□□□□ -0.3
SCLT1-204ENST00000503215 M0QZ24 198 aa13.17□□□□□ -0.3
SCLT1-204ENST00000503215 CHRM2P08172 466 aa13.17□□□□□ -0.3
SCLT1-204ENST00000503215 JUNBP17275 347 aaPredicted RBP13.17□□□□□ -0.3
SCLT1-204ENST00000503215 BCL3P20749 454 aa13.17□□□□□ -0.3
SCLT1-204ENST00000503215 EDDM3BP56851 147 aa13.17□□□□□ -0.3
SCLT1-204ENST00000503215 RCN1Q15293 331 aa13.17□□□□□ -0.3
SCLT1-204ENST00000503215 OCLNQ16625 522 aa13.17□□□□□ -0.3
SCLT1-204ENST00000503215 TPRX1Q8N7U7 411 aa13.17□□□□□ -0.3
SCLT1-204ENST00000503215 MBOAT4Q96T53 435 aa13.17□□□□□ -0.3
SCLT1-204ENST00000503215 CHCHD3Q9NX63 227 aaKnown RBP13.17□□□□□ -0.3
SCLT1-204ENST00000503215 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.17□□□□□ -0.3
SCLT1-204ENST00000503215 FOXJ3Q9UPW0 622 aa13.17□□□□□ -0.3
SCLT1-204ENST00000503215 FAM90A8PA6NJQ4 464 aa13.16□□□□□ -0.3
SCLT1-204ENST00000503215 TIMM23O14925 209 aa13.16□□□□□ -0.3
SCLT1-204ENST00000503215 GATBO75879 557 aaKnown RBP13.16□□□□□ -0.3
SCLT1-204ENST00000503215 ZNF728P0DKX0 622 aa13.16□□□□□ -0.3
SCLT1-204ENST00000503215 GABRA5P31644 462 aa13.16□□□□□ -0.3
SCLT1-204ENST00000503215 POU3F4P49335 361 aa13.16□□□□□ -0.3
SCLT1-204ENST00000503215 SNU13P55769 128 aaKnown RBP13.16□□□□□ -0.3
SCLT1-204ENST00000503215 SNRPGP62308 76 aaKnown RBP13.16□□□□□ -0.3
SCLT1-204ENST00000503215 EDDM3AQ14507 147 aa13.16□□□□□ -0.3
SCLT1-204ENST00000503215 FAM220AQ7Z4H9 259 aa13.16□□□□□ -0.3
SCLT1-204ENST00000503215 CBR4Q8N4T8 237 aa13.16□□□□□ -0.3
SCLT1-204ENST00000503215 OR51A4Q8NGJ6 313 aa13.16□□□□□ -0.3
SCLT1-204ENST00000503215 TRUB1Q8WWH5 349 aaKnown RBP13.16□□□□□ -0.3
SCLT1-204ENST00000503215 RFT1Q96AA3 541 aa13.16□□□□□ -0.3
SCLT1-204ENST00000503215 BORCS8Q96FH0 119 aa13.16□□□□□ -0.3
SCLT1-204ENST00000503215 SPACA5Q96QH8 159 aa13.16□□□□□ -0.3
SCLT1-204ENST00000503215 CHST6Q9GZX3 395 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms