RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CANT1Q8WVQ1 401 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 PP6455Q8WZ26 134 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 SGCDQ92629 289 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 CORO2AQ92828 525 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 NSL1Q96IY1 281 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 LRGUKQ96M69 825 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 CNN2Q99439 309 aaKnown RBP4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 CHST5Q9GZS9 411 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 TMEM133Q9H2Q1 129 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 NCOR1P1Q9H4R4 102 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 CLN6Q9NWW5 311 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 TAS2R3Q9NYW6 316 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 ZMAT5Q9UDW3 170 aaKnown RBP4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 ENOPH1Q9UHY7 261 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 OR52A1Q9UKL2 312 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 SLC7A11Q9UPY5 501 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 SLC22A13Q9Y226 551 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 TSSC4Q9Y5U2 329 aaPredicted RBP4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 SESN1Q9Y6P5 492 aa4.9□□□□□ -1.63
LSM3P4-201ENST00000502948 KMT2CQ8NEZ4 4911 aaKnown RBP4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 NOTCH3Q9UM47 2321 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 IGHV2-26A0A0B4J1V2 119 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 TRBV2A0A0J9YWF9 115 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 FUOMA2VDF0 154 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 PRR32B1ATL7 298 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 GNGT2O14610 69 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 MGST3O14880 152 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 SERPINA3P01011 423 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 IGLV1-47P01700 117 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 TFF1P04155 84 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 RPSAP08865 295 aaKnown RBP4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 T-ENOLP0DO92 83 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 CD33P20138 364 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 COX7A1P24310 79 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 HTR1DP28221 377 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 PEX2P28328 305 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 VDAC2P45880 294 aaPredicted RBP4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 CXCR4P61073 352 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 RPS7P62081 194 aaKnown RBP4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 ACTA2P62736 377 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 BLCAPP62952 87 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 ACTG2P63267 376 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 ACTC1P68032 377 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 ACTA1P68133 377 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 PAX5Q02548 391 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 COL10A1Q03692 680 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 PTGES3Q15185 160 aaKnown RBP4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 BCL2L15Q5TBC7 163 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 AADACL4Q5VUY2 407 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 HEPN1Q6WQI6 88 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 MEPCEQ7L2J0 689 aaKnown RBP4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 TCF23Q7RTU1 214 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 COMMD2Q86X83 199 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 THNSL2Q86YJ6 484 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 GID4Q8IVV7 300 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 C11orf44Q8N8P7 122 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 BBS1Q8NFJ9 593 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 OR5AU1Q8NGC0 362 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 OR4M1Q8NGD0 313 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 OR4P4Q8NGL7 312 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 OTULINQ96BN8 352 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 CEP19Q96LK0 163 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 MCRIP2Q9BUT9 160 aaKnown RBP4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 CLEC7AQ9BXN2 247 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 GAL3ST2Q9H3Q3 398 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 ADGRL4Q9HBW9 690 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 PAPOLBQ9NRJ5 636 aaKnown RBP4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 TAS2R1Q9NYW7 299 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 MTCH1Q9NZJ7 389 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 DPM3Q9P2X0 92 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 GLS2Q9UI32 602 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 HHLA2Q9UM44 414 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 COPS3Q9UNS2 423 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 PCDHGB5Q9Y5G0 923 aa4.89□□□□□ -1.63
LSM3P4-201ENST00000502948 TCRBV3S1A0A5B6 114 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 TMEM82A0PJX8 343 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 FAM90A18PA6NE21 464 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 FAM90A16PA6NEW6 464 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 FAM90A20PA6NIJ5 464 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 FAM90A9PA6NNJ1 464 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 FAM90A12PA8MX19 464 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 FAM90A5PA8MXJ8 464 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 LEUTXA8MZ59 168 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 LY6LH3BQJ8 138 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 PSMD9O00233 223 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 OR2F2O95006 317 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 CLIC3O95833 236 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 FAM107AO95990 144 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 ISG15P05161 165 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 OR2T7P0C7T2 308 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 FAM90A15PP0C7V4 464 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 FAM90A13PP0C7W8 464 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 FAM90A14PP0C7W9 464 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 FAM90A24PP0C7X0 464 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 UBCP0CG48 685 aaKnown RBP4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 CEACAM3P40198 252 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 RBP2P50120 134 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 RAB13P51153 203 aa4.88□□□□□ -1.63
LSM3P4-201ENST00000502948 HCCSP53701 268 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms