RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 F8VWA3 439 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 IGLV1-47P01700 117 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 FABP3P05413 133 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 ATP6V1B1P15313 513 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 DEFB136Q30KP8 78 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 SAMD4BQ5PRF9 694 aaKnown RBP12.29□□□□□ -0.44
HDAC6-236ENST00000498808 HACD2Q6Y1H2 254 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 ADAMTSL5Q6ZMM2 481 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 MEPCEQ7L2J0 689 aaKnown RBP12.29□□□□□ -0.44
HDAC6-236ENST00000498808 COMMD2Q86X83 199 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 ABHD12Q8N2K0 398 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 ZNF454Q8N9F8 522 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 OR5M8Q8NGP6 311 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 OR51E1Q8TCB6 317 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 ITFG2Q969R8 447 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 SNX22Q96L94 193 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 GORASP2Q9H8Y8 452 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 GPR84Q9NQS5 396 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 PAPOLBQ9NRJ5 636 aaKnown RBP12.29□□□□□ -0.44
HDAC6-236ENST00000498808 GPR173Q9NS66 373 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 ENPP5Q9UJA9 477 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 MOB4Q9Y3A3 225 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 HSPE1-MOB4S4R3N1 261 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 SORL1Q92673 2214 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 LEUTXA8MZ59 168 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 SEC14L6B5MCN3 397 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 PSMD9O00233 223 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 GSC2O15499 205 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 ARHGDIBP52566 201 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 HMGA2P52926 109 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 PSME3P61289 254 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 TMEM42Q69YG0 159 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 ASRGL1Q7L266 308 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 KRT77Q7Z794 578 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 ANGPTL5Q86XS5 388 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 RNF148Q8N7C7 305 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 OR52N4Q8NGI2 321 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 ZNF596Q8TC21 504 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 MCUR1Q96AQ8 359 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 OTULINQ96BN8 352 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 CITED4Q96RK1 184 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 CDRT15Q96T59 188 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 TEAD3Q99594 435 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 OR51V1Q9H2C8 321 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 EFCAB1Q9HAE3 211 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 IL1RAPQ9NPH3 570 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 FGFR1OP2Q9NVK5 253 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 KIAA2026Q5HYC2 2103 aa12.28□□□□□ -0.44
HDAC6-236ENST00000498808 FAM172BPA6NC97 362 aa12.27□□□□□ -0.45
HDAC6-236ENST00000498808 IGHA1P01876 353 aa12.27□□□□□ -0.45
HDAC6-236ENST00000498808 TPTE2P1Q5T6R2 138 aa12.27□□□□□ -0.45
HDAC6-236ENST00000498808 PRAMEF5Q5TYX0 476 aa12.27□□□□□ -0.45
HDAC6-236ENST00000498808 LCN1P1Q5VSP4 162 aa12.27□□□□□ -0.45
HDAC6-236ENST00000498808 COMMD1Q8N668 190 aa12.27□□□□□ -0.45
HDAC6-236ENST00000498808 CHST6Q9GZX3 395 aa12.27□□□□□ -0.45
HDAC6-236ENST00000498808 PBOV1Q9GZY1 135 aa12.27□□□□□ -0.45
HDAC6-236ENST00000498808 NKX1-2Q9UD57 310 aaPredicted RBP12.27□□□□□ -0.45
HDAC6-236ENST00000498808 TMEM269A0A1B0GVZ9 245 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 ARRDC5A6NEK1 342 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 ACOD1A6NK06 481 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 SERPINE3A8MV23 424 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 HMGB1P1B2RPK0 211 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-236ENST00000498808 LY6LH3BQJ8 138 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 TNFRSF11BO00300 401 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 GMNNO75496 209 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 DHRS3O75911 302 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 ALOX5APP20292 161 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 GDNFP39905 211 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 IL24Q13007 206 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 GRK1Q15835 563 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 HLA-DRB5Q30154 266 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 CLVS2Q5SYC1 327 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 OVCH2Q7RTZ1 564 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 RTN4RL2Q86UN3 420 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 IQCF1Q8N6M8 205 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 C5orf56Q8N8D9 126 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 AQP11Q8NBQ7 271 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 OR8U1Q8NH10 309 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 PKIBQ9C010 78 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 DCLRE1BQ9H816 532 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 ZNF286AQ9HBT8 521 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 MTCH1Q9NZJ7 389 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 DNAJB9Q9UBS3 223 aa12.26□□□□□ -0.45
HDAC6-236ENST00000498808 FAM90A18PA6NE21 464 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 FAM90A16PA6NEW6 464 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 FAM90A20PA6NIJ5 464 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 FAM90A9PA6NNJ1 464 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 FAM90A12PA8MX19 464 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 FAM90A5PA8MXJ8 464 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 BUB1B-PAK6H3BSN5 160 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 DLGAP1O14490 977 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 PSPNO60542 156 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 KRT36O76013 467 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 LY86O95711 162 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 RPLP1P05386 114 aaKnown RBP12.25□□□□□ -0.45
HDAC6-236ENST00000498808 FAM90A15PP0C7V4 464 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 FAM90A13PP0C7W8 464 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 FAM90A14PP0C7W9 464 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 FAM90A24PP0C7X0 464 aa12.25□□□□□ -0.45
HDAC6-236ENST00000498808 H2AFXP16104 143 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms